Hb_086639_130

Information

Type -
Description -
Location Contig86639: 77186-77812
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086639_130 0.0 - - -
2 Hb_002053_120 0.0850340895 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
3 Hb_031136_020 0.0876187679 - - -
4 Hb_000340_090 0.0880270557 - - -
5 Hb_010435_020 0.1924773558 - - PREDICTED: uncharacterized protein LOC104216897 [Nicotiana sylvestris]
6 Hb_000483_210 0.2545067264 - - hypothetical protein JCGZ_03497 [Jatropha curcas]
7 Hb_000427_120 0.2678927647 - - -
8 Hb_001477_140 0.3174101637 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_000060_120 0.3544908715 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
10 Hb_061637_010 0.3568893107 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
11 Hb_000419_090 0.3645448457 - - hypothetical protein JCGZ_18532 [Jatropha curcas]
12 Hb_021156_030 0.3731716238 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
13 Hb_001342_050 0.3790659262 - - -
14 Hb_000982_140 0.4018624544 - - histidine kinase 1 plant, putative [Ricinus communis]
15 Hb_012586_030 0.4023623985 - - hypothetical protein CICLE_v10014868mg [Citrus clementina]
16 Hb_006355_050 0.4058045857 - - -
17 Hb_001817_030 0.4095777495 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
18 Hb_000590_040 0.4152429791 - - hypothetical protein MPER_09217 [Moniliophthora perniciosa FA553]
19 Hb_178607_010 0.416455815 - - PREDICTED: uncharacterized protein LOC105789535 [Gossypium raimondii]
20 Hb_000038_190 0.4226301695 - - -

Gene co-expression network

sample Hb_086639_130 Hb_086639_130 Hb_002053_120 Hb_002053_120 Hb_086639_130--Hb_002053_120 Hb_031136_020 Hb_031136_020 Hb_086639_130--Hb_031136_020 Hb_000340_090 Hb_000340_090 Hb_086639_130--Hb_000340_090 Hb_010435_020 Hb_010435_020 Hb_086639_130--Hb_010435_020 Hb_000483_210 Hb_000483_210 Hb_086639_130--Hb_000483_210 Hb_000427_120 Hb_000427_120 Hb_086639_130--Hb_000427_120 Hb_002053_120--Hb_031136_020 Hb_002053_120--Hb_000340_090 Hb_002053_120--Hb_010435_020 Hb_002053_120--Hb_000427_120 Hb_002053_120--Hb_000483_210 Hb_031136_020--Hb_000340_090 Hb_031136_020--Hb_010435_020 Hb_031136_020--Hb_000427_120 Hb_031136_020--Hb_000483_210 Hb_000340_090--Hb_010435_020 Hb_000340_090--Hb_000427_120 Hb_000340_090--Hb_000483_210 Hb_010435_020--Hb_000427_120 Hb_061637_010 Hb_061637_010 Hb_010435_020--Hb_061637_010 Hb_000115_300 Hb_000115_300 Hb_000483_210--Hb_000115_300 Hb_001477_140 Hb_001477_140 Hb_000483_210--Hb_001477_140 Hb_000427_120--Hb_061637_010 Hb_021156_030 Hb_021156_030 Hb_000427_120--Hb_021156_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.334283 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.728223 0 0

CAGE analysis