Hb_086922_010

Information

Type -
Description -
Location Contig86922: 51-654
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_012073432.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
swissprot
ID C0LGT6
description LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1
trembl
ID A0A067KLC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06107 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086922_010 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
2 Hb_007632_150 0.0172312408 - - conserved hypothetical protein [Ricinus communis]
3 Hb_135811_030 0.0822311208 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_069877_010 0.0868625188 - - chaperone protein DNAj, putative [Ricinus communis]
5 Hb_000429_060 0.1041736798 - - conserved hypothetical protein [Ricinus communis]
6 Hb_113444_010 0.1222000887 - - -
7 Hb_001049_080 0.1275214964 - - -
8 Hb_001959_230 0.1313645272 - - PREDICTED: uncharacterized protein LOC105638436 [Jatropha curcas]
9 Hb_174245_020 0.1517950888 - - -
10 Hb_000392_200 0.1984904387 - - PREDICTED: cytochrome P450 98A2-like isoform X2 [Phoenix dactylifera]
11 Hb_001761_110 0.2133250255 - - Contains similarity to Cf-2.2 gene gb
12 Hb_131101_010 0.2176326213 - - -
13 Hb_014720_060 0.2326743381 - - hypothetical protein JCGZ_11469 [Jatropha curcas]
14 Hb_000441_010 0.2333855502 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
15 Hb_002545_030 0.2382216125 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_023226_050 0.261358868 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
17 Hb_000964_160 0.2786834322 - - PREDICTED: uncharacterized protein LOC102617979 isoform X2 [Citrus sinensis]
18 Hb_007245_010 0.2820231784 - - PREDICTED: uncharacterized protein LOC104783698 [Camelina sativa]
19 Hb_043295_010 0.2821214487 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
20 Hb_002450_160 0.2908685855 - - PREDICTED: protein 108 [Jatropha curcas]

Gene co-expression network

sample Hb_086922_010 Hb_086922_010 Hb_007632_150 Hb_007632_150 Hb_086922_010--Hb_007632_150 Hb_135811_030 Hb_135811_030 Hb_086922_010--Hb_135811_030 Hb_069877_010 Hb_069877_010 Hb_086922_010--Hb_069877_010 Hb_000429_060 Hb_000429_060 Hb_086922_010--Hb_000429_060 Hb_113444_010 Hb_113444_010 Hb_086922_010--Hb_113444_010 Hb_001049_080 Hb_001049_080 Hb_086922_010--Hb_001049_080 Hb_007632_150--Hb_135811_030 Hb_007632_150--Hb_069877_010 Hb_007632_150--Hb_001049_080 Hb_007632_150--Hb_000429_060 Hb_007632_150--Hb_113444_010 Hb_135811_030--Hb_069877_010 Hb_135811_030--Hb_000429_060 Hb_135811_030--Hb_113444_010 Hb_001959_230 Hb_001959_230 Hb_135811_030--Hb_001959_230 Hb_174245_020 Hb_174245_020 Hb_135811_030--Hb_174245_020 Hb_069877_010--Hb_000429_060 Hb_069877_010--Hb_113444_010 Hb_069877_010--Hb_001959_230 Hb_069877_010--Hb_174245_020 Hb_000429_060--Hb_113444_010 Hb_000429_060--Hb_001959_230 Hb_000429_060--Hb_174245_020 Hb_113444_010--Hb_001959_230 Hb_113444_010--Hb_174245_020 Hb_001761_110 Hb_001761_110 Hb_113444_010--Hb_001761_110 Hb_000392_200 Hb_000392_200 Hb_001049_080--Hb_000392_200 Hb_023226_050 Hb_023226_050 Hb_001049_080--Hb_023226_050 Hb_001049_080--Hb_135811_030 Hb_001049_080--Hb_069877_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0856706 0 0.202263 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis