Hb_087086_020

Information

Type -
Description -
Location Contig87086: 25001-28722
Sequence    

Annotation

kegg
ID pxb:103942752
description neutral alpha-glucosidase C-like
nr
ID KDP39742.1
description hypothetical protein JCGZ_02762 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02762 PE=3 SV=1
Gene Ontology
ID GO:0004553
description neutral alpha-glucosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_087086_020 0.0 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
2 Hb_002928_160 0.1622328588 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
3 Hb_001300_100 0.173972828 - - -
4 Hb_063805_010 0.1787335919 - - -
5 Hb_005291_040 0.1958681338 - - PREDICTED: gamma-gliadin [Jatropha curcas]
6 Hb_027472_210 0.1959047633 - - PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas]
7 Hb_003126_030 0.196620314 - - conserved hypothetical protein [Ricinus communis]
8 Hb_031711_010 0.1981149361 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
9 Hb_000904_130 0.1990582551 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
10 Hb_000538_010 0.200448591 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 1 isoform X2 [Jatropha curcas]
11 Hb_000707_060 0.2018046311 - - -
12 Hb_000045_320 0.2028000631 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
13 Hb_000283_130 0.204903877 - - PREDICTED: PRA1 family protein E-like [Populus euphratica]
14 Hb_002805_170 0.2052164623 - - exosome complex exonuclease rrp45, putative [Ricinus communis]
15 Hb_001117_190 0.2063334175 transcription factor TF Family: FAR1 FAR1-related sequence 11 [Theobroma cacao]
16 Hb_045046_010 0.2068129723 transcription factor TF Family: TUB hypothetical protein POPTR_0011s11070g [Populus trichocarpa]
17 Hb_000317_150 0.2079901768 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
18 Hb_000140_330 0.2082988952 - - PREDICTED: uncharacterized protein LOC105642909 [Jatropha curcas]
19 Hb_000390_220 0.2096970736 - - PREDICTED: uncharacterized protein LOC100244219 [Vitis vinifera]
20 Hb_026198_040 0.2112511317 - - PREDICTED: uncharacterized protein LOC105628901 [Jatropha curcas]

Gene co-expression network

sample Hb_087086_020 Hb_087086_020 Hb_002928_160 Hb_002928_160 Hb_087086_020--Hb_002928_160 Hb_001300_100 Hb_001300_100 Hb_087086_020--Hb_001300_100 Hb_063805_010 Hb_063805_010 Hb_087086_020--Hb_063805_010 Hb_005291_040 Hb_005291_040 Hb_087086_020--Hb_005291_040 Hb_027472_210 Hb_027472_210 Hb_087086_020--Hb_027472_210 Hb_003126_030 Hb_003126_030 Hb_087086_020--Hb_003126_030 Hb_001662_030 Hb_001662_030 Hb_002928_160--Hb_001662_030 Hb_000363_280 Hb_000363_280 Hb_002928_160--Hb_000363_280 Hb_002928_160--Hb_005291_040 Hb_075449_020 Hb_075449_020 Hb_002928_160--Hb_075449_020 Hb_000045_320 Hb_000045_320 Hb_002928_160--Hb_000045_320 Hb_000283_130 Hb_000283_130 Hb_002928_160--Hb_000283_130 Hb_001300_100--Hb_063805_010 Hb_058551_010 Hb_058551_010 Hb_001300_100--Hb_058551_010 Hb_001300_100--Hb_027472_210 Hb_002890_150 Hb_002890_150 Hb_001300_100--Hb_002890_150 Hb_013405_150 Hb_013405_150 Hb_001300_100--Hb_013405_150 Hb_002947_040 Hb_002947_040 Hb_001300_100--Hb_002947_040 Hb_063805_010--Hb_027472_210 Hb_092337_020 Hb_092337_020 Hb_063805_010--Hb_092337_020 Hb_000563_330 Hb_000563_330 Hb_063805_010--Hb_000563_330 Hb_063805_010--Hb_002947_040 Hb_042509_030 Hb_042509_030 Hb_063805_010--Hb_042509_030 Hb_010738_010 Hb_010738_010 Hb_005291_040--Hb_010738_010 Hb_002997_160 Hb_002997_160 Hb_005291_040--Hb_002997_160 Hb_005883_010 Hb_005883_010 Hb_005291_040--Hb_005883_010 Hb_005291_040--Hb_000283_130 Hb_007229_040 Hb_007229_040 Hb_005291_040--Hb_007229_040 Hb_001117_190 Hb_001117_190 Hb_005291_040--Hb_001117_190 Hb_027472_210--Hb_092337_020 Hb_027472_210--Hb_000563_330 Hb_007083_010 Hb_007083_010 Hb_027472_210--Hb_007083_010 Hb_000169_190 Hb_000169_190 Hb_027472_210--Hb_000169_190 Hb_027472_210--Hb_005291_040 Hb_102129_070 Hb_102129_070 Hb_003126_030--Hb_102129_070 Hb_000140_080 Hb_000140_080 Hb_003126_030--Hb_000140_080 Hb_008554_120 Hb_008554_120 Hb_003126_030--Hb_008554_120 Hb_000152_340 Hb_000152_340 Hb_003126_030--Hb_000152_340 Hb_000406_240 Hb_000406_240 Hb_003126_030--Hb_000406_240 Hb_000169_130 Hb_000169_130 Hb_003126_030--Hb_000169_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.901184 1.17471 0.632386 0.0446876 0.83275 0.241466
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.104876 0.329676 0.287196 0.101557 0.158839

CAGE analysis