Hb_088202_010

Information

Type -
Description -
Location Contig88202: 2345-3600
Sequence    

Annotation

kegg
ID mdm:103449386
description uncharacterized LOC103449386
nr
ID KDP32316.1
description hypothetical protein JCGZ_13241 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7W5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13241 PE=4 SV=1
Gene Ontology
ID GO:0016706
description hypothetical protein JCGZ_13241

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_088202_010 0.0 - - hypothetical protein JCGZ_13241 [Jatropha curcas]
2 Hb_007161_010 0.1172327087 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
3 Hb_000363_200 0.125779328 - - 40S ribosomal protein S8, putative [Ricinus communis]
4 Hb_005614_050 0.1308096097 - - PREDICTED: aspartate aminotransferase, mitochondrial-like [Jatropha curcas]
5 Hb_001935_030 0.1312137364 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006153_120 0.1371734448 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
7 Hb_002078_460 0.1444350035 - - -
8 Hb_006594_020 0.1454231204 - - PREDICTED: uncharacterized protein LOC105138974 isoform X1 [Populus euphratica]
9 Hb_001545_060 0.1489549865 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
10 Hb_000196_090 0.1496272606 - - axonemal dynein light chain, putative [Ricinus communis]
11 Hb_007181_070 0.1499090092 - - PREDICTED: alpha-galactosidase-like [Jatropha curcas]
12 Hb_001538_140 0.1573886424 - - PREDICTED: PXMP2/4 family protein 4-like [Jatropha curcas]
13 Hb_005694_080 0.158950866 - - DNA-directed RNA polymerase III, putative [Ricinus communis]
14 Hb_003226_280 0.1593815529 - - PREDICTED: peter Pan-like protein [Populus euphratica]
15 Hb_001638_020 0.1597450977 - - PREDICTED: protein OSB1, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_148930_010 0.1599300129 - - PREDICTED: uncharacterized protein LOC105648400 [Jatropha curcas]
17 Hb_000179_050 0.1613817747 - - 40S ribosomal protein S17A [Hevea brasiliensis]
18 Hb_000089_160 0.1626470791 - - 60S ribosomal protein L5B [Hevea brasiliensis]
19 Hb_001329_210 0.1627342374 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
20 Hb_145084_010 0.1628914409 - - PREDICTED: uncharacterized protein LOC105646270 [Jatropha curcas]

Gene co-expression network

sample Hb_088202_010 Hb_088202_010 Hb_007161_010 Hb_007161_010 Hb_088202_010--Hb_007161_010 Hb_000363_200 Hb_000363_200 Hb_088202_010--Hb_000363_200 Hb_005614_050 Hb_005614_050 Hb_088202_010--Hb_005614_050 Hb_001935_030 Hb_001935_030 Hb_088202_010--Hb_001935_030 Hb_006153_120 Hb_006153_120 Hb_088202_010--Hb_006153_120 Hb_002078_460 Hb_002078_460 Hb_088202_010--Hb_002078_460 Hb_007161_010--Hb_005614_050 Hb_007161_010--Hb_000363_200 Hb_000179_050 Hb_000179_050 Hb_007161_010--Hb_000179_050 Hb_007161_010--Hb_002078_460 Hb_003551_050 Hb_003551_050 Hb_007161_010--Hb_003551_050 Hb_000753_130 Hb_000753_130 Hb_007161_010--Hb_000753_130 Hb_003226_280 Hb_003226_280 Hb_000363_200--Hb_003226_280 Hb_000865_070 Hb_000865_070 Hb_000363_200--Hb_000865_070 Hb_003097_210 Hb_003097_210 Hb_000363_200--Hb_003097_210 Hb_001545_060 Hb_001545_060 Hb_000363_200--Hb_001545_060 Hb_000363_200--Hb_002078_460 Hb_116898_010 Hb_116898_010 Hb_000363_200--Hb_116898_010 Hb_002756_020 Hb_002756_020 Hb_005614_050--Hb_002756_020 Hb_005614_050--Hb_003551_050 Hb_005614_050--Hb_000363_200 Hb_001538_140 Hb_001538_140 Hb_005614_050--Hb_001538_140 Hb_006594_020 Hb_006594_020 Hb_005614_050--Hb_006594_020 Hb_006831_030 Hb_006831_030 Hb_001935_030--Hb_006831_030 Hb_001473_120 Hb_001473_120 Hb_001935_030--Hb_001473_120 Hb_001329_210 Hb_001329_210 Hb_001935_030--Hb_001329_210 Hb_001123_120 Hb_001123_120 Hb_001935_030--Hb_001123_120 Hb_001935_030--Hb_002078_460 Hb_000069_100 Hb_000069_100 Hb_001935_030--Hb_000069_100 Hb_006153_120--Hb_000179_050 Hb_000671_150 Hb_000671_150 Hb_006153_120--Hb_000671_150 Hb_000086_570 Hb_000086_570 Hb_006153_120--Hb_000086_570 Hb_100506_010 Hb_100506_010 Hb_006153_120--Hb_100506_010 Hb_001881_020 Hb_001881_020 Hb_006153_120--Hb_001881_020 Hb_000089_160 Hb_000089_160 Hb_006153_120--Hb_000089_160 Hb_001616_060 Hb_001616_060 Hb_002078_460--Hb_001616_060 Hb_002028_130 Hb_002028_130 Hb_002078_460--Hb_002028_130 Hb_001278_050 Hb_001278_050 Hb_002078_460--Hb_001278_050 Hb_007382_150 Hb_007382_150 Hb_002078_460--Hb_007382_150 Hb_002078_460--Hb_000865_070 Hb_000032_220 Hb_000032_220 Hb_002078_460--Hb_000032_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.647955 0.113483 0.0508795 0.273299 0.437375 0.710915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08132 1.94143 1.8161 0.865133 0

CAGE analysis