Hb_088542_010

Information

Type -
Description -
Location Contig88542: 1483-2871
Sequence    

Annotation

kegg
ID rcu:RCOM_1617460
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID KDP20096.1
description hypothetical protein JCGZ_05865 [Jatropha curcas]
swissprot
ID H2DH18
description Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1
trembl
ID A0A067J8K5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05865 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp736a12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61486: 1604-2555
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_088542_010 0.0 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
2 Hb_001632_010 0.0746681208 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
3 Hb_073212_010 0.1306883238 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
4 Hb_001677_050 0.1481223905 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
5 Hb_129067_010 0.1504705629 - - Cytochrome P450 superfamily protein [Theobroma cacao]
6 Hb_000605_010 0.1713040231 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
7 Hb_000733_040 0.1739592075 - - hypothetical protein POPTR_0010s20310g [Populus trichocarpa]
8 Hb_000590_080 0.1780242112 - - PREDICTED: metal tolerance protein 11 [Jatropha curcas]
9 Hb_031862_170 0.17946571 - - immunophilin, putative [Ricinus communis]
10 Hb_001691_050 0.1795871697 - - -
11 Hb_004007_150 0.1861065351 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 4 [Jatropha curcas]
12 Hb_029510_010 0.1899475349 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
13 Hb_138600_010 0.193787831 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
14 Hb_012384_050 0.2054669491 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
15 Hb_095471_010 0.2119207847 - - PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Jatropha curcas]
16 Hb_002232_290 0.2165530513 - - -
17 Hb_000465_120 0.2210123243 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
18 Hb_105085_010 0.2217913787 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
19 Hb_003534_040 0.2258434258 - - hypothetical protein POPTR_0009s14420g [Populus trichocarpa]
20 Hb_000101_210 0.2281030257 - - PREDICTED: uncharacterized protein LOC105646445 [Jatropha curcas]

Gene co-expression network

sample Hb_088542_010 Hb_088542_010 Hb_001632_010 Hb_001632_010 Hb_088542_010--Hb_001632_010 Hb_073212_010 Hb_073212_010 Hb_088542_010--Hb_073212_010 Hb_001677_050 Hb_001677_050 Hb_088542_010--Hb_001677_050 Hb_129067_010 Hb_129067_010 Hb_088542_010--Hb_129067_010 Hb_000605_010 Hb_000605_010 Hb_088542_010--Hb_000605_010 Hb_000733_040 Hb_000733_040 Hb_088542_010--Hb_000733_040 Hb_001632_010--Hb_001677_050 Hb_001632_010--Hb_073212_010 Hb_001632_010--Hb_129067_010 Hb_001632_010--Hb_000605_010 Hb_012384_050 Hb_012384_050 Hb_001632_010--Hb_012384_050 Hb_004007_150 Hb_004007_150 Hb_073212_010--Hb_004007_150 Hb_073212_010--Hb_000605_010 Hb_073212_010--Hb_012384_050 Hb_001691_050 Hb_001691_050 Hb_073212_010--Hb_001691_050 Hb_001677_050--Hb_004007_150 Hb_001677_050--Hb_000605_010 Hb_001138_010 Hb_001138_010 Hb_001677_050--Hb_001138_010 Hb_001677_050--Hb_073212_010 Hb_129067_010--Hb_000733_040 Hb_129067_010--Hb_073212_010 Hb_095471_010 Hb_095471_010 Hb_129067_010--Hb_095471_010 Hb_129067_010--Hb_012384_050 Hb_000605_010--Hb_001138_010 Hb_002234_220 Hb_002234_220 Hb_000605_010--Hb_002234_220 Hb_000879_050 Hb_000879_050 Hb_000605_010--Hb_000879_050 Hb_089140_060 Hb_089140_060 Hb_000733_040--Hb_089140_060 Hb_000733_040--Hb_073212_010 Hb_040506_010 Hb_040506_010 Hb_000733_040--Hb_040506_010 Hb_000733_040--Hb_001691_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.4444 3.27785 0.785215 2.85492 14.3842 12.1755
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.363323 0.285796 3.89965 5.48223 0.328671

CAGE analysis