Hb_089114_010

Information

Type -
Description -
Location Contig89114: 7901-9026
Sequence    

Annotation

kegg
ID rcu:RCOM_1174190
description hypothetical protein
nr
ID XP_012088268.1
description PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJN9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25774 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089114_010 0.0 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
2 Hb_002965_070 0.122780503 - - PREDICTED: extensin [Jatropha curcas]
3 Hb_061908_030 0.142637984 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
4 Hb_033930_010 0.1479655721 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
5 Hb_047442_010 0.1491114151 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
6 Hb_000317_190 0.1583457355 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
7 Hb_001894_160 0.1632987803 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000563_510 0.1708033817 - - epoxide hydrolase, putative [Ricinus communis]
9 Hb_011671_110 0.1726870912 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
10 Hb_000622_210 0.1740646649 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X3 [Jatropha curcas]
11 Hb_001776_200 0.1753711401 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
12 Hb_021443_030 0.1755201073 - - PREDICTED: uncharacterized protein LOC105648566 [Jatropha curcas]
13 Hb_000318_410 0.1784089794 - - PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Jatropha curcas]
14 Hb_005941_020 0.184718223 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
15 Hb_000221_230 0.1869936347 transcription factor TF Family: Jumonji PREDICTED: F-box protein At1g78280 [Jatropha curcas]
16 Hb_002030_110 0.1874252347 - - PREDICTED: RING-H2 finger protein ATL32-like [Jatropha curcas]
17 Hb_161901_020 0.188187838 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Vitis vinifera]
18 Hb_008020_020 0.1889285171 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Jatropha curcas]
19 Hb_002639_130 0.1918565904 - - hypothetical protein JCGZ_08129 [Jatropha curcas]
20 Hb_002095_030 0.1922744747 - - hypothetical protein MIMGU_mgv1a021906mg, partial [Erythranthe guttata]

Gene co-expression network

sample Hb_089114_010 Hb_089114_010 Hb_002965_070 Hb_002965_070 Hb_089114_010--Hb_002965_070 Hb_061908_030 Hb_061908_030 Hb_089114_010--Hb_061908_030 Hb_033930_010 Hb_033930_010 Hb_089114_010--Hb_033930_010 Hb_047442_010 Hb_047442_010 Hb_089114_010--Hb_047442_010 Hb_000317_190 Hb_000317_190 Hb_089114_010--Hb_000317_190 Hb_001894_160 Hb_001894_160 Hb_089114_010--Hb_001894_160 Hb_002965_070--Hb_047442_010 Hb_002965_070--Hb_000317_190 Hb_000563_510 Hb_000563_510 Hb_002965_070--Hb_000563_510 Hb_000308_010 Hb_000308_010 Hb_002965_070--Hb_000308_010 Hb_002965_070--Hb_033930_010 Hb_010126_030 Hb_010126_030 Hb_061908_030--Hb_010126_030 Hb_002151_130 Hb_002151_130 Hb_061908_030--Hb_002151_130 Hb_000451_040 Hb_000451_040 Hb_061908_030--Hb_000451_040 Hb_000984_290 Hb_000984_290 Hb_061908_030--Hb_000984_290 Hb_004586_130 Hb_004586_130 Hb_061908_030--Hb_004586_130 Hb_002960_100 Hb_002960_100 Hb_061908_030--Hb_002960_100 Hb_005941_020 Hb_005941_020 Hb_033930_010--Hb_005941_020 Hb_033930_010--Hb_001894_160 Hb_011671_110 Hb_011671_110 Hb_033930_010--Hb_011671_110 Hb_000318_410 Hb_000318_410 Hb_033930_010--Hb_000318_410 Hb_000622_210 Hb_000622_210 Hb_033930_010--Hb_000622_210 Hb_000086_640 Hb_000086_640 Hb_033930_010--Hb_000086_640 Hb_047442_010--Hb_011671_110 Hb_005394_010 Hb_005394_010 Hb_047442_010--Hb_005394_010 Hb_047442_010--Hb_000317_190 Hb_000111_390 Hb_000111_390 Hb_047442_010--Hb_000111_390 Hb_047442_010--Hb_001894_160 Hb_000317_190--Hb_005941_020 Hb_124951_010 Hb_124951_010 Hb_000317_190--Hb_124951_010 Hb_000317_190--Hb_001894_160 Hb_000317_190--Hb_011671_110 Hb_015026_020 Hb_015026_020 Hb_000317_190--Hb_015026_020 Hb_001894_160--Hb_011671_110 Hb_001894_160--Hb_005941_020 Hb_000928_250 Hb_000928_250 Hb_001894_160--Hb_000928_250 Hb_001894_160--Hb_015026_020 Hb_001894_160--Hb_000622_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.382692 4.91712 6.62628 0.875618 0.556021 0.406663
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.415847 0.280302 0 0.52781 1.23021

CAGE analysis