Hb_089685_010

Information

Type -
Description -
Location Contig89685: 2968-5444
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089685_010 0.0 - - -
2 Hb_001373_150 0.1708618734 - - PREDICTED: uncharacterized protein LOC105628778 [Jatropha curcas]
3 Hb_000576_010 0.2007228404 - - PREDICTED: uncharacterized protein LOC105638289 [Jatropha curcas]
4 Hb_000709_060 0.2015945186 - - PREDICTED: abscisic-aldehyde oxidase-like isoform X5 [Populus euphratica]
5 Hb_000220_050 0.2017284165 transcription factor TF Family: Orphans PREDICTED: putative zinc finger protein At1g68190 isoform X1 [Jatropha curcas]
6 Hb_012779_100 0.2027827812 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000816_130 0.2044545571 - - PREDICTED: uncharacterized protein LOC105649213 [Jatropha curcas]
8 Hb_046157_020 0.2049421725 - - PREDICTED: uncharacterized protein LOC105647566 [Jatropha curcas]
9 Hb_000317_030 0.2073531092 transcription factor TF Family: ULT PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
10 Hb_001279_310 0.2092351605 - - hypothetical protein JCGZ_10212 [Jatropha curcas]
11 Hb_035273_030 0.2100380457 rubber biosynthesis Gene Name: Mevalonate kinase mevalonate kinase [Hevea brasiliensis]
12 Hb_000092_130 0.2103671714 - - PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Jatropha curcas]
13 Hb_001960_040 0.2121946354 - - PREDICTED: CTP synthase [Jatropha curcas]
14 Hb_008554_020 0.2128980646 - - -
15 Hb_003408_020 0.2132389517 - - hypothetical protein RCOM_0453040 [Ricinus communis]
16 Hb_030565_130 0.2134986469 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
17 Hb_000684_270 0.2136958284 - - PREDICTED: probable DNA helicase MCM8 isoform X1 [Jatropha curcas]
18 Hb_100506_010 0.2149535794 - - PREDICTED: uncharacterized protein LOC105133651 isoform X2 [Populus euphratica]
19 Hb_000046_490 0.2155464246 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
20 Hb_065525_020 0.2160427109 - - PREDICTED: geranylgeranyl transferase type-1 subunit beta [Jatropha curcas]

Gene co-expression network

sample Hb_089685_010 Hb_089685_010 Hb_001373_150 Hb_001373_150 Hb_089685_010--Hb_001373_150 Hb_000576_010 Hb_000576_010 Hb_089685_010--Hb_000576_010 Hb_000709_060 Hb_000709_060 Hb_089685_010--Hb_000709_060 Hb_000220_050 Hb_000220_050 Hb_089685_010--Hb_000220_050 Hb_012779_100 Hb_012779_100 Hb_089685_010--Hb_012779_100 Hb_000816_130 Hb_000816_130 Hb_089685_010--Hb_000816_130 Hb_030565_130 Hb_030565_130 Hb_001373_150--Hb_030565_130 Hb_002301_290 Hb_002301_290 Hb_001373_150--Hb_002301_290 Hb_008554_020 Hb_008554_020 Hb_001373_150--Hb_008554_020 Hb_002235_400 Hb_002235_400 Hb_001373_150--Hb_002235_400 Hb_000184_040 Hb_000184_040 Hb_001373_150--Hb_000184_040 Hb_006501_110 Hb_006501_110 Hb_001373_150--Hb_006501_110 Hb_000317_030 Hb_000317_030 Hb_000576_010--Hb_000317_030 Hb_004994_170 Hb_004994_170 Hb_000576_010--Hb_004994_170 Hb_004204_070 Hb_004204_070 Hb_000576_010--Hb_004204_070 Hb_004223_130 Hb_004223_130 Hb_000576_010--Hb_004223_130 Hb_010381_070 Hb_010381_070 Hb_000576_010--Hb_010381_070 Hb_000975_290 Hb_000975_290 Hb_000576_010--Hb_000975_290 Hb_001587_190 Hb_001587_190 Hb_000709_060--Hb_001587_190 Hb_004108_080 Hb_004108_080 Hb_000709_060--Hb_004108_080 Hb_003893_090 Hb_003893_090 Hb_000709_060--Hb_003893_090 Hb_102465_010 Hb_102465_010 Hb_000709_060--Hb_102465_010 Hb_000442_100 Hb_000442_100 Hb_000709_060--Hb_000442_100 Hb_003408_020 Hb_003408_020 Hb_000220_050--Hb_003408_020 Hb_003175_040 Hb_003175_040 Hb_000220_050--Hb_003175_040 Hb_000220_050--Hb_000317_030 Hb_000089_160 Hb_000089_160 Hb_000220_050--Hb_000089_160 Hb_000061_320 Hb_000061_320 Hb_000220_050--Hb_000061_320 Hb_000922_270 Hb_000922_270 Hb_000220_050--Hb_000922_270 Hb_002301_230 Hb_002301_230 Hb_012779_100--Hb_002301_230 Hb_000023_340 Hb_000023_340 Hb_012779_100--Hb_000023_340 Hb_000444_050 Hb_000444_050 Hb_012779_100--Hb_000444_050 Hb_000671_150 Hb_000671_150 Hb_012779_100--Hb_000671_150 Hb_000696_310 Hb_000696_310 Hb_012779_100--Hb_000696_310 Hb_000671_090 Hb_000671_090 Hb_012779_100--Hb_000671_090 Hb_000990_080 Hb_000990_080 Hb_000816_130--Hb_000990_080 Hb_003016_020 Hb_003016_020 Hb_000816_130--Hb_003016_020 Hb_000816_130--Hb_000576_010 Hb_116349_160 Hb_116349_160 Hb_000816_130--Hb_116349_160 Hb_000307_140 Hb_000307_140 Hb_000816_130--Hb_000307_140 Hb_033843_010 Hb_033843_010 Hb_000816_130--Hb_033843_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.170595 0.022824 0.104197 0.0722031 0.0213163 0.165579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.312623 0.122936 0.150629 0.0989305 0

CAGE analysis