Hb_089920_010

Information

Type -
Description -
Location Contig89920: 3-830
Sequence    

Annotation

kegg
ID rcu:RCOM_1729460
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_012078062.1
description PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067K9S7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13032 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089920_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_003371_120 0.170396575 - - hypothetical protein JCGZ_05278 [Jatropha curcas]
3 Hb_001951_030 0.1853695689 - - hypothetical protein JCGZ_04584 [Jatropha curcas]
4 Hb_000997_110 0.1867648645 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
5 Hb_002273_080 0.1926172107 - - geranylgeranyl reductase [Monoraphidium neglectum]
6 Hb_005157_010 0.1930685227 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
7 Hb_000215_410 0.2120272819 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
8 Hb_005841_080 0.2127635874 - - hypothetical protein POPTR_0018s11370g [Populus trichocarpa]
9 Hb_020178_060 0.215143699 - - PREDICTED: nucleobase-ascorbate transporter 3 [Jatropha curcas]
10 Hb_004976_060 0.2154883463 - - -
11 Hb_001338_050 0.2196468483 - - hypothetical protein POPTR_0016s05400g [Populus trichocarpa]
12 Hb_002273_050 0.2285751744 - - PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Jatropha curcas]
13 Hb_006026_010 0.2334045014 - - PREDICTED: cyclin-dependent kinase inhibitor 3-like [Jatropha curcas]
14 Hb_000645_240 0.2368236254 - - AMP dependent ligase, putative [Ricinus communis]
15 Hb_001269_040 0.2377398423 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_000160_240 0.2425350763 - - PREDICTED: uncharacterized protein At1g66480 [Jatropha curcas]
17 Hb_002903_130 0.2429404385 - - epoxide hydrolase, putative [Ricinus communis]
18 Hb_000010_350 0.2443333963 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
19 Hb_007481_020 0.2446917357 - - -
20 Hb_000097_040 0.2447410836 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_089920_010 Hb_089920_010 Hb_003371_120 Hb_003371_120 Hb_089920_010--Hb_003371_120 Hb_001951_030 Hb_001951_030 Hb_089920_010--Hb_001951_030 Hb_000997_110 Hb_000997_110 Hb_089920_010--Hb_000997_110 Hb_002273_080 Hb_002273_080 Hb_089920_010--Hb_002273_080 Hb_005157_010 Hb_005157_010 Hb_089920_010--Hb_005157_010 Hb_000215_410 Hb_000215_410 Hb_089920_010--Hb_000215_410 Hb_003371_120--Hb_000997_110 Hb_006026_010 Hb_006026_010 Hb_003371_120--Hb_006026_010 Hb_005400_040 Hb_005400_040 Hb_003371_120--Hb_005400_040 Hb_000538_190 Hb_000538_190 Hb_003371_120--Hb_000538_190 Hb_020178_060 Hb_020178_060 Hb_003371_120--Hb_020178_060 Hb_001951_030--Hb_005157_010 Hb_007416_150 Hb_007416_150 Hb_001951_030--Hb_007416_150 Hb_000670_110 Hb_000670_110 Hb_001951_030--Hb_000670_110 Hb_011618_040 Hb_011618_040 Hb_001951_030--Hb_011618_040 Hb_008225_100 Hb_008225_100 Hb_001951_030--Hb_008225_100 Hb_000997_110--Hb_005400_040 Hb_000010_350 Hb_000010_350 Hb_000997_110--Hb_000010_350 Hb_005147_040 Hb_005147_040 Hb_000997_110--Hb_005147_040 Hb_000976_290 Hb_000976_290 Hb_000997_110--Hb_000976_290 Hb_002918_150 Hb_002918_150 Hb_000997_110--Hb_002918_150 Hb_002273_050 Hb_002273_050 Hb_002273_080--Hb_002273_050 Hb_002273_080--Hb_000215_410 Hb_002686_280 Hb_002686_280 Hb_002273_080--Hb_002686_280 Hb_129204_060 Hb_129204_060 Hb_002273_080--Hb_129204_060 Hb_001269_690 Hb_001269_690 Hb_002273_080--Hb_001269_690 Hb_001269_040 Hb_001269_040 Hb_002273_080--Hb_001269_040 Hb_003299_010 Hb_003299_010 Hb_005157_010--Hb_003299_010 Hb_005841_080 Hb_005841_080 Hb_005157_010--Hb_005841_080 Hb_000685_060 Hb_000685_060 Hb_005157_010--Hb_000685_060 Hb_003504_040 Hb_003504_040 Hb_005157_010--Hb_003504_040 Hb_133636_010 Hb_133636_010 Hb_005157_010--Hb_133636_010 Hb_000215_410--Hb_002273_050 Hb_000215_410--Hb_129204_060 Hb_002235_240 Hb_002235_240 Hb_000215_410--Hb_002235_240 Hb_000836_120 Hb_000836_120 Hb_000215_410--Hb_000836_120 Hb_000215_410--Hb_001269_690
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.632692 8.66879 0.596013 0.224196 2.19758 0.4063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.515931 0.354982 0.552088 4.96158 0.204277

CAGE analysis