Hb_090497_010

Information

Type -
Description -
Location Contig90497: 232-1376
Sequence    

Annotation

kegg
ID egr:104435707
description Werner Syndrome-like exonuclease
nr
ID XP_012075997.1
description PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
swissprot
ID Q84LH3
description Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=1
trembl
ID A0A067KRT4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11089 PE=4 SV=1
Gene Ontology
ID GO:0003676
description werner syndrome-like exonuclease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_090497_010 0.0 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
2 Hb_038011_010 0.1515869668 - - hypothetical protein POPTR_0031s004401g, partial [Populus trichocarpa]
3 Hb_004899_060 0.2192491121 - - 46 kDa ketoavyl-ACP synthase [Ricinus communis]
4 Hb_003881_050 0.2342559576 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
5 Hb_000101_160 0.2387314943 - - PREDICTED: uncharacterized protein LOC105133607 isoform X1 [Populus euphratica]
6 Hb_000099_210 0.238912386 - - PREDICTED: uncharacterized protein LOC105645736 [Jatropha curcas]
7 Hb_012725_100 0.2397445587 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001450_100 0.2419934072 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
9 Hb_008778_010 0.2427402189 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_001369_380 0.2459353236 - - F-box family protein, putative [Theobroma cacao]
11 Hb_015707_010 0.2477512545 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
12 Hb_002326_050 0.2497154927 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
13 Hb_000857_050 0.2501969518 - - PREDICTED: protein YLS9 [Jatropha curcas]
14 Hb_007603_010 0.2507671389 - - conserved hypothetical protein [Ricinus communis]
15 Hb_010317_030 0.252855581 - - unknown [Picea sitchensis]
16 Hb_002687_040 0.2543917064 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
17 Hb_048116_010 0.255465481 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
18 Hb_002035_080 0.2559025453 - - unnamed protein product [Vitis vinifera]
19 Hb_000397_120 0.2580604993 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
20 Hb_000031_150 0.2583317075 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]

Gene co-expression network

sample Hb_090497_010 Hb_090497_010 Hb_038011_010 Hb_038011_010 Hb_090497_010--Hb_038011_010 Hb_004899_060 Hb_004899_060 Hb_090497_010--Hb_004899_060 Hb_003881_050 Hb_003881_050 Hb_090497_010--Hb_003881_050 Hb_000101_160 Hb_000101_160 Hb_090497_010--Hb_000101_160 Hb_000099_210 Hb_000099_210 Hb_090497_010--Hb_000099_210 Hb_012725_100 Hb_012725_100 Hb_090497_010--Hb_012725_100 Hb_073452_010 Hb_073452_010 Hb_038011_010--Hb_073452_010 Hb_048116_010 Hb_048116_010 Hb_038011_010--Hb_048116_010 Hb_011287_090 Hb_011287_090 Hb_038011_010--Hb_011287_090 Hb_099864_010 Hb_099864_010 Hb_038011_010--Hb_099864_010 Hb_002326_050 Hb_002326_050 Hb_038011_010--Hb_002326_050 Hb_001366_120 Hb_001366_120 Hb_004899_060--Hb_001366_120 Hb_005976_050 Hb_005976_050 Hb_004899_060--Hb_005976_050 Hb_003688_160 Hb_003688_160 Hb_004899_060--Hb_003688_160 Hb_001143_190 Hb_001143_190 Hb_004899_060--Hb_001143_190 Hb_031862_130 Hb_031862_130 Hb_004899_060--Hb_031862_130 Hb_008695_140 Hb_008695_140 Hb_004899_060--Hb_008695_140 Hb_003881_050--Hb_038011_010 Hb_001242_090 Hb_001242_090 Hb_003881_050--Hb_001242_090 Hb_085863_020 Hb_085863_020 Hb_003881_050--Hb_085863_020 Hb_003881_050--Hb_073452_010 Hb_003881_050--Hb_003688_160 Hb_001678_020 Hb_001678_020 Hb_000101_160--Hb_001678_020 Hb_001506_010 Hb_001506_010 Hb_000101_160--Hb_001506_010 Hb_000857_050 Hb_000857_050 Hb_000101_160--Hb_000857_050 Hb_007603_010 Hb_007603_010 Hb_000101_160--Hb_007603_010 Hb_138600_010 Hb_138600_010 Hb_000101_160--Hb_138600_010 Hb_002233_090 Hb_002233_090 Hb_000101_160--Hb_002233_090 Hb_000099_210--Hb_007603_010 Hb_008406_140 Hb_008406_140 Hb_000099_210--Hb_008406_140 Hb_000099_210--Hb_005976_050 Hb_000031_150 Hb_000031_150 Hb_000099_210--Hb_000031_150 Hb_002102_030 Hb_002102_030 Hb_000099_210--Hb_002102_030 Hb_007810_100 Hb_007810_100 Hb_000099_210--Hb_007810_100 Hb_001450_100 Hb_001450_100 Hb_012725_100--Hb_001450_100 Hb_024272_010 Hb_024272_010 Hb_012725_100--Hb_024272_010 Hb_001983_010 Hb_001983_010 Hb_012725_100--Hb_001983_010 Hb_013399_080 Hb_013399_080 Hb_012725_100--Hb_013399_080 Hb_010317_030 Hb_010317_030 Hb_012725_100--Hb_010317_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4259 6.61282 5.69298 23.317 29.2848 34.9694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0799519 49.6041 9.1506 4.94723

CAGE analysis