Hb_090545_010

Information

Type -
Description -
Location Contig90545: 1-404
Sequence    

Annotation

kegg
ID pop:POPTR_0004s23250g
description hypothetical protein
nr
ID XP_012066665.1
description PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LD65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00237 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_090545_010 0.0 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
2 Hb_006913_050 0.183377558 - - -
3 Hb_141212_010 0.2245615824 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
4 Hb_026337_010 0.2397869113 desease resistance Gene Name: NB-ARC hypothetical protein CICLE_v10002052mg [Citrus clementina]
5 Hb_046120_010 0.2449680978 - - -
6 Hb_001708_010 0.2639722437 - - PREDICTED: putative disease resistance protein At4g11170 [Malus domestica]
7 Hb_000123_020 0.2639940163 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At1g61190 [Vitis vinifera]
8 Hb_000366_020 0.2664894619 - - -
9 Hb_001950_040 0.2666272016 - - -
10 Hb_001810_020 0.2740361191 - - -
11 Hb_097347_010 0.275380572 - - PREDICTED: molybdenum cofactor sulfurase-like, partial [Malus domestica]
12 Hb_148658_010 0.275875822 - - -
13 Hb_000679_200 0.2776116537 - - EIN3-binding F box protein 1 [Theobroma cacao]
14 Hb_157968_010 0.2783477858 - - Disease resistance protein RPS5, putative [Ricinus communis]
15 Hb_181441_010 0.2850439036 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
16 Hb_000098_300 0.2875058308 - - -
17 Hb_002078_190 0.2876890397 - - conserved hypothetical protein [Ricinus communis]
18 Hb_114079_010 0.2932760583 - - hypothetical protein CICLE_v10008147mg [Citrus clementina]
19 Hb_059641_010 0.2951144686 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
20 Hb_003813_080 0.2957835392 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]

Gene co-expression network

sample Hb_090545_010 Hb_090545_010 Hb_006913_050 Hb_006913_050 Hb_090545_010--Hb_006913_050 Hb_141212_010 Hb_141212_010 Hb_090545_010--Hb_141212_010 Hb_026337_010 Hb_026337_010 Hb_090545_010--Hb_026337_010 Hb_046120_010 Hb_046120_010 Hb_090545_010--Hb_046120_010 Hb_001708_010 Hb_001708_010 Hb_090545_010--Hb_001708_010 Hb_000123_020 Hb_000123_020 Hb_090545_010--Hb_000123_020 Hb_003854_020 Hb_003854_020 Hb_006913_050--Hb_003854_020 Hb_006913_050--Hb_026337_010 Hb_000123_030 Hb_000123_030 Hb_006913_050--Hb_000123_030 Hb_006913_050--Hb_141212_010 Hb_154538_010 Hb_154538_010 Hb_006913_050--Hb_154538_010 Hb_141212_010--Hb_026337_010 Hb_063480_020 Hb_063480_020 Hb_141212_010--Hb_063480_020 Hb_054586_020 Hb_054586_020 Hb_141212_010--Hb_054586_020 Hb_054885_020 Hb_054885_020 Hb_141212_010--Hb_054885_020 Hb_097347_010 Hb_097347_010 Hb_141212_010--Hb_097347_010 Hb_049160_010 Hb_049160_010 Hb_141212_010--Hb_049160_010 Hb_026337_010--Hb_063480_020 Hb_000130_060 Hb_000130_060 Hb_026337_010--Hb_000130_060 Hb_002370_030 Hb_002370_030 Hb_026337_010--Hb_002370_030 Hb_000679_200 Hb_000679_200 Hb_026337_010--Hb_000679_200 Hb_001278_040 Hb_001278_040 Hb_026337_010--Hb_001278_040 Hb_000082_020 Hb_000082_020 Hb_046120_010--Hb_000082_020 Hb_041025_010 Hb_041025_010 Hb_046120_010--Hb_041025_010 Hb_114079_010 Hb_114079_010 Hb_046120_010--Hb_114079_010 Hb_001252_200 Hb_001252_200 Hb_046120_010--Hb_001252_200 Hb_000084_130 Hb_000084_130 Hb_046120_010--Hb_000084_130 Hb_032258_020 Hb_032258_020 Hb_046120_010--Hb_032258_020 Hb_007441_090 Hb_007441_090 Hb_001708_010--Hb_007441_090 Hb_106688_010 Hb_106688_010 Hb_001708_010--Hb_106688_010 Hb_001708_010--Hb_114079_010 Hb_003740_040 Hb_003740_040 Hb_001708_010--Hb_003740_040 Hb_157968_010 Hb_157968_010 Hb_001708_010--Hb_157968_010 Hb_048183_010 Hb_048183_010 Hb_001708_010--Hb_048183_010 Hb_000123_020--Hb_000123_030 Hb_018118_020 Hb_018118_020 Hb_000123_020--Hb_018118_020 Hb_002737_020 Hb_002737_020 Hb_000123_020--Hb_002737_020 Hb_007846_040 Hb_007846_040 Hb_000123_020--Hb_007846_040 Hb_000123_020--Hb_006913_050 Hb_059641_010 Hb_059641_010 Hb_000123_020--Hb_059641_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.918789 8.87943 1.04836 8.33083 0 14.8045
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.06026 0.838832 0 3.33544 1.78684

CAGE analysis