Hb_091336_010

Information

Type -
Description -
Location Contig91336: 86-830
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091336_010 0.0 - - -
2 Hb_158349_010 0.1505528524 - - plastid CUL1 [Hevea brasiliensis]
3 Hb_003602_080 0.1599183633 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
4 Hb_010012_020 0.160994816 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003906_030 0.1724500151 - - mads box protein, putative [Ricinus communis]
6 Hb_000668_170 0.1732446428 - - sulfate transporter, putative [Ricinus communis]
7 Hb_000203_090 0.173484109 - - hypothetical protein POPTR_0013s04080g [Populus trichocarpa]
8 Hb_000925_020 0.1750917259 - - PREDICTED: protein YLS9 [Jatropha curcas]
9 Hb_003925_130 0.1790667929 - - glutathione s-transferase, putative [Ricinus communis]
10 Hb_004458_010 0.1813610143 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
11 Hb_039410_010 0.1821451349 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
12 Hb_113676_010 0.1827328879 - - PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
13 Hb_000769_030 0.1829821216 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_007951_090 0.1847970773 - - hypothetical protein POPTR_0003s06080g [Populus trichocarpa]
15 Hb_101370_010 0.1861187727 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
16 Hb_011429_010 0.1898081287 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
17 Hb_014361_140 0.1920000284 - - PREDICTED: peroxidase 51 [Jatropha curcas]
18 Hb_001414_120 0.1922419397 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
19 Hb_000321_010 0.1924999155 - - Chitinase 1 precursor, putative [Ricinus communis]
20 Hb_182625_010 0.1947364471 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]

Gene co-expression network

sample Hb_091336_010 Hb_091336_010 Hb_158349_010 Hb_158349_010 Hb_091336_010--Hb_158349_010 Hb_003602_080 Hb_003602_080 Hb_091336_010--Hb_003602_080 Hb_010012_020 Hb_010012_020 Hb_091336_010--Hb_010012_020 Hb_003906_030 Hb_003906_030 Hb_091336_010--Hb_003906_030 Hb_000668_170 Hb_000668_170 Hb_091336_010--Hb_000668_170 Hb_000203_090 Hb_000203_090 Hb_091336_010--Hb_000203_090 Hb_143933_010 Hb_143933_010 Hb_158349_010--Hb_143933_010 Hb_002965_180 Hb_002965_180 Hb_158349_010--Hb_002965_180 Hb_113676_010 Hb_113676_010 Hb_158349_010--Hb_113676_010 Hb_130739_010 Hb_130739_010 Hb_158349_010--Hb_130739_010 Hb_101370_010 Hb_101370_010 Hb_158349_010--Hb_101370_010 Hb_003602_080--Hb_010012_020 Hb_011429_010 Hb_011429_010 Hb_003602_080--Hb_011429_010 Hb_000769_030 Hb_000769_030 Hb_003602_080--Hb_000769_030 Hb_039410_010 Hb_039410_010 Hb_003602_080--Hb_039410_010 Hb_165552_020 Hb_165552_020 Hb_003602_080--Hb_165552_020 Hb_098175_010 Hb_098175_010 Hb_003602_080--Hb_098175_010 Hb_003674_010 Hb_003674_010 Hb_010012_020--Hb_003674_010 Hb_002420_030 Hb_002420_030 Hb_010012_020--Hb_002420_030 Hb_010573_030 Hb_010573_030 Hb_010012_020--Hb_010573_030 Hb_010012_020--Hb_165552_020 Hb_010012_020--Hb_011429_010 Hb_000960_020 Hb_000960_020 Hb_003906_030--Hb_000960_020 Hb_007545_200 Hb_007545_200 Hb_003906_030--Hb_007545_200 Hb_003925_130 Hb_003925_130 Hb_003906_030--Hb_003925_130 Hb_000304_040 Hb_000304_040 Hb_003906_030--Hb_000304_040 Hb_020805_160 Hb_020805_160 Hb_003906_030--Hb_020805_160 Hb_005183_010 Hb_005183_010 Hb_000668_170--Hb_005183_010 Hb_000029_280 Hb_000029_280 Hb_000668_170--Hb_000029_280 Hb_010142_040 Hb_010142_040 Hb_000668_170--Hb_010142_040 Hb_001213_140 Hb_001213_140 Hb_000668_170--Hb_001213_140 Hb_000827_090 Hb_000827_090 Hb_000668_170--Hb_000827_090 Hb_000087_180 Hb_000087_180 Hb_000668_170--Hb_000087_180 Hb_000203_090--Hb_039410_010 Hb_000167_090 Hb_000167_090 Hb_000203_090--Hb_000167_090 Hb_182625_010 Hb_182625_010 Hb_000203_090--Hb_182625_010 Hb_000203_090--Hb_000769_030 Hb_002548_010 Hb_002548_010 Hb_000203_090--Hb_002548_010 Hb_014361_140 Hb_014361_140 Hb_000203_090--Hb_014361_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.742281 10.2359 2.8889 10.791 0.100593 0.621842
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis