Hb_091369_010

Information

Type -
Description -
Location Contig91369: 245-574
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091369_010 0.0 - - -
2 Hb_008473_010 0.0009832345 - - PREDICTED: laccase-14-like [Jatropha curcas]
3 Hb_002673_050 0.0020307486 - - -
4 Hb_000944_010 0.0116623174 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
5 Hb_003400_030 0.0117605974 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
6 Hb_002400_450 0.0164874065 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
7 Hb_000260_190 0.0189295991 - - -
8 Hb_034667_010 0.0230886923 - - -
9 Hb_008151_030 0.0295895055 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_010399_020 0.033492593 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
11 Hb_108404_010 0.0504980956 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_013205_010 0.0658582453 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
13 Hb_128287_010 0.0692357442 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
14 Hb_000204_180 0.1104692364 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
15 Hb_000227_110 0.1381212931 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
16 Hb_027394_010 0.1427197206 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
17 Hb_068347_020 0.1427408679 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
18 Hb_009066_010 0.1477999321 - - -
19 Hb_002141_010 0.1497590662 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
20 Hb_021068_020 0.168470156 - - -

Gene co-expression network

sample Hb_091369_010 Hb_091369_010 Hb_008473_010 Hb_008473_010 Hb_091369_010--Hb_008473_010 Hb_002673_050 Hb_002673_050 Hb_091369_010--Hb_002673_050 Hb_000944_010 Hb_000944_010 Hb_091369_010--Hb_000944_010 Hb_003400_030 Hb_003400_030 Hb_091369_010--Hb_003400_030 Hb_002400_450 Hb_002400_450 Hb_091369_010--Hb_002400_450 Hb_000260_190 Hb_000260_190 Hb_091369_010--Hb_000260_190 Hb_008473_010--Hb_002673_050 Hb_008473_010--Hb_000944_010 Hb_008473_010--Hb_003400_030 Hb_008473_010--Hb_002400_450 Hb_008473_010--Hb_000260_190 Hb_002673_050--Hb_000944_010 Hb_002673_050--Hb_003400_030 Hb_002673_050--Hb_002400_450 Hb_002673_050--Hb_000260_190 Hb_000944_010--Hb_003400_030 Hb_000944_010--Hb_002400_450 Hb_000944_010--Hb_000260_190 Hb_034667_010 Hb_034667_010 Hb_000944_010--Hb_034667_010 Hb_003400_030--Hb_002400_450 Hb_003400_030--Hb_000260_190 Hb_003400_030--Hb_034667_010 Hb_002400_450--Hb_000260_190 Hb_002400_450--Hb_034667_010 Hb_008151_030 Hb_008151_030 Hb_002400_450--Hb_008151_030 Hb_000260_190--Hb_034667_010 Hb_000260_190--Hb_008151_030 Hb_010399_020 Hb_010399_020 Hb_000260_190--Hb_010399_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 1.48118 1.31428
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis