Hb_091384_010

Information

Type -
Description -
Location Contig91384: 3-852
Sequence    

Annotation

kegg
ID gmx:100814772
description probable protein phosphatase 2C 28-like
nr
ID KDP34919.1
description hypothetical protein JCGZ_09207 [Jatropha curcas]
swissprot
ID Q0D673
description Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1
trembl
ID A0A067KSU6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09207 PE=4 SV=1
Gene Ontology
ID GO:0004722
description probable protein phosphatase 2c 28

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091384_010 0.0 - - hypothetical protein JCGZ_09207 [Jatropha curcas]
2 Hb_000640_220 0.0816924734 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Jatropha curcas]
3 Hb_002273_130 0.08172966 - - PREDICTED: T-complex protein 1 subunit eta [Gossypium raimondii]
4 Hb_005895_040 0.0823200279 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
5 Hb_000261_520 0.0858548493 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
6 Hb_001341_120 0.0863015317 - - hypothetical protein B456_001G130300 [Gossypium raimondii]
7 Hb_000358_250 0.0895598222 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
8 Hb_000480_010 0.0906190864 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000076_270 0.092038884 - - PREDICTED: DDRGK domain-containing protein 1 [Populus euphratica]
10 Hb_004701_030 0.0926602379 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
11 Hb_000211_110 0.0946127272 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Jatropha curcas]
12 Hb_001894_030 0.0960083868 - - Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
13 Hb_002477_130 0.0980447482 - - conserved hypothetical protein [Ricinus communis]
14 Hb_030131_040 0.0984310814 - - ribosome biogenesis protein tsr1, putative [Ricinus communis]
15 Hb_002942_080 0.099285754 - - PREDICTED: signal recognition particle subunit SRP68 [Jatropha curcas]
16 Hb_003126_100 0.1000947134 - - hypothetical protein POPTR_0005s11280g [Populus trichocarpa]
17 Hb_030827_030 0.1025823822 - - PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Jatropha curcas]
18 Hb_007668_040 0.1027867345 - - PREDICTED: uncharacterized protein LOC103409082 [Malus domestica]
19 Hb_002587_020 0.1029325345 - - nucleic acid binding protein, putative [Ricinus communis]
20 Hb_009151_020 0.1031367518 - - PREDICTED: DNA polymerase delta catalytic subunit [Jatropha curcas]

Gene co-expression network

sample Hb_091384_010 Hb_091384_010 Hb_000640_220 Hb_000640_220 Hb_091384_010--Hb_000640_220 Hb_002273_130 Hb_002273_130 Hb_091384_010--Hb_002273_130 Hb_005895_040 Hb_005895_040 Hb_091384_010--Hb_005895_040 Hb_000261_520 Hb_000261_520 Hb_091384_010--Hb_000261_520 Hb_001341_120 Hb_001341_120 Hb_091384_010--Hb_001341_120 Hb_000358_250 Hb_000358_250 Hb_091384_010--Hb_000358_250 Hb_021422_010 Hb_021422_010 Hb_000640_220--Hb_021422_010 Hb_002477_130 Hb_002477_130 Hb_000640_220--Hb_002477_130 Hb_000104_080 Hb_000104_080 Hb_000640_220--Hb_000104_080 Hb_001584_290 Hb_001584_290 Hb_000640_220--Hb_001584_290 Hb_000365_140 Hb_000365_140 Hb_000640_220--Hb_000365_140 Hb_003126_100 Hb_003126_100 Hb_000640_220--Hb_003126_100 Hb_030131_040 Hb_030131_040 Hb_002273_130--Hb_030131_040 Hb_002273_130--Hb_001341_120 Hb_001541_090 Hb_001541_090 Hb_002273_130--Hb_001541_090 Hb_000076_270 Hb_000076_270 Hb_002273_130--Hb_000076_270 Hb_000059_150 Hb_000059_150 Hb_002273_130--Hb_000059_150 Hb_001300_070 Hb_001300_070 Hb_002273_130--Hb_001300_070 Hb_000422_140 Hb_000422_140 Hb_005895_040--Hb_000422_140 Hb_009151_020 Hb_009151_020 Hb_005895_040--Hb_009151_020 Hb_005895_040--Hb_002477_130 Hb_004656_060 Hb_004656_060 Hb_005895_040--Hb_004656_060 Hb_004701_030 Hb_004701_030 Hb_005895_040--Hb_004701_030 Hb_002499_070 Hb_002499_070 Hb_005895_040--Hb_002499_070 Hb_000755_080 Hb_000755_080 Hb_000261_520--Hb_000755_080 Hb_000375_030 Hb_000375_030 Hb_000261_520--Hb_000375_030 Hb_000261_520--Hb_000640_220 Hb_000261_520--Hb_005895_040 Hb_004376_030 Hb_004376_030 Hb_000261_520--Hb_004376_030 Hb_001341_120--Hb_030131_040 Hb_001341_120--Hb_000076_270 Hb_000480_010 Hb_000480_010 Hb_001341_120--Hb_000480_010 Hb_004837_190 Hb_004837_190 Hb_001341_120--Hb_004837_190 Hb_000913_050 Hb_000913_050 Hb_001341_120--Hb_000913_050 Hb_000358_250--Hb_002477_130 Hb_031939_010 Hb_031939_010 Hb_000358_250--Hb_031939_010 Hb_000116_180 Hb_000116_180 Hb_000358_250--Hb_000116_180 Hb_000538_100 Hb_000538_100 Hb_000358_250--Hb_000538_100 Hb_000429_200 Hb_000429_200 Hb_000358_250--Hb_000429_200 Hb_003849_250 Hb_003849_250 Hb_000358_250--Hb_003849_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.21101 1.18828 1.86381 1.38267 4.78859 3.91934
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.74866 1.37402 0.946773 1.32307 0.697501

CAGE analysis