Hb_091826_020

Information

Type -
Description -
Location Contig91826: 20862-26043
Sequence    

Annotation

kegg
ID cit:102615596
description putative disease resistance protein At4g11170-like
nr
ID KDP38818.1
description hypothetical protein JCGZ_04975 [Jatropha curcas]
swissprot
ID Q9C5Q9
description Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1
trembl
ID A0A067KV31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04975 PE=4 SV=1
Gene Ontology
ID GO:0005515
description tmv resistance protein n-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62308: 19274-21153 , PASA_asmbl_62309: 20651-21061 , PASA_asmbl_62310: 21467-23521 , PASA_asmbl_62311: 24147-24619 , PASA_asmbl_62312: 24867-26989
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091826_020 0.0 - - hypothetical protein JCGZ_04975 [Jatropha curcas]
2 Hb_004924_020 0.1053535011 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_008963_010 0.1084593014 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
4 Hb_000665_090 0.1165783321 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000714_080 0.1187602856 transcription factor TF Family: Trihelix GT-2 factor [Glycine max]
6 Hb_116103_010 0.1257951478 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
7 Hb_000904_110 0.1272202949 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Eucalyptus grandis]
8 Hb_010721_010 0.1335526824 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
9 Hb_004724_310 0.138566791 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
10 Hb_002066_050 0.1414711358 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
11 Hb_001019_020 0.1424635456 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000925_110 0.1441562047 - - Spotted leaf protein, putative [Ricinus communis]
13 Hb_158926_010 0.1473274206 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
14 Hb_000808_090 0.1482736102 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
15 Hb_101058_020 0.1491042547 - - DWNN domain isoform 2 [Theobroma cacao]
16 Hb_011915_020 0.1519466016 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
17 Hb_023386_060 0.1522241546 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
18 Hb_029622_090 0.1541201709 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
19 Hb_001198_170 0.1555752464 - - -
20 Hb_002048_070 0.1563222276 - - hypothetical protein JCGZ_15146 [Jatropha curcas]

Gene co-expression network

sample Hb_091826_020 Hb_091826_020 Hb_004924_020 Hb_004924_020 Hb_091826_020--Hb_004924_020 Hb_008963_010 Hb_008963_010 Hb_091826_020--Hb_008963_010 Hb_000665_090 Hb_000665_090 Hb_091826_020--Hb_000665_090 Hb_000714_080 Hb_000714_080 Hb_091826_020--Hb_000714_080 Hb_116103_010 Hb_116103_010 Hb_091826_020--Hb_116103_010 Hb_000904_110 Hb_000904_110 Hb_091826_020--Hb_000904_110 Hb_004924_020--Hb_008963_010 Hb_004924_020--Hb_116103_010 Hb_004924_020--Hb_000904_110 Hb_173029_010 Hb_173029_010 Hb_004924_020--Hb_173029_010 Hb_000668_220 Hb_000668_220 Hb_004924_020--Hb_000668_220 Hb_004724_310 Hb_004724_310 Hb_008963_010--Hb_004724_310 Hb_008963_010--Hb_000714_080 Hb_000996_100 Hb_000996_100 Hb_008963_010--Hb_000996_100 Hb_158110_010 Hb_158110_010 Hb_008963_010--Hb_158110_010 Hb_002066_050 Hb_002066_050 Hb_000665_090--Hb_002066_050 Hb_000665_090--Hb_000714_080 Hb_000808_090 Hb_000808_090 Hb_000665_090--Hb_000808_090 Hb_000925_110 Hb_000925_110 Hb_000665_090--Hb_000925_110 Hb_101058_020 Hb_101058_020 Hb_000665_090--Hb_101058_020 Hb_000665_090--Hb_000904_110 Hb_000714_080--Hb_002066_050 Hb_000714_080--Hb_000925_110 Hb_000714_080--Hb_004724_310 Hb_000714_080--Hb_000904_110 Hb_116103_010--Hb_000904_110 Hb_064885_010 Hb_064885_010 Hb_116103_010--Hb_064885_010 Hb_002849_010 Hb_002849_010 Hb_116103_010--Hb_002849_010 Hb_116103_010--Hb_173029_010 Hb_116103_010--Hb_000668_220 Hb_000904_110--Hb_064885_010 Hb_000904_110--Hb_173029_010 Hb_000904_110--Hb_002849_010 Hb_000904_110--Hb_000668_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0508626 5.66945 4.22434 4.27793 0.237842 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0192481 0.0151457 0 0.132397 0.257071

CAGE analysis