Hb_092233_010

Information

Type -
Description -
Location Contig92233: 676-813
Sequence    

Annotation

kegg
ID cic:CICLE_v10026756mg
description hypothetical protein
nr
ID Q9M7N0.1
description RecName: Full=Profilin-3; AltName: Full=Pollen allergen Hev b 8.0201; AltName: Allergen=Hev b 8.0201 [Hevea brasiliensis]
swissprot
ID Q9M7N0
description Profilin-3 OS=Hevea brasiliensis PE=1 SV=1
trembl
ID A0A067ELM6
description Profilin OS=Citrus sinensis GN=CISIN_1g032890mg PE=3 SV=1
Gene Ontology
ID GO:0005737
description profilin 3 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092233_010 0.0 - - RecName: Full=Profilin-3; AltName: Full=Pollen allergen Hev b 8.0201; AltName: Allergen=Hev b 8.0201 [Hevea brasiliensis]
2 Hb_000175_140 0.207773793 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000896_110 0.2126280156 - - -
4 Hb_000205_200 0.2458174905 - - -
5 Hb_033376_010 0.272159217 - - hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
6 Hb_005021_010 0.2785096728 - - PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
7 Hb_000072_340 0.28738662 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000665_110 0.2909216804 - - Ribosomal protein S11-beta [Theobroma cacao]
9 Hb_000136_160 0.2959753878 - - calmodulin binding protein, putative [Ricinus communis]
10 Hb_007120_040 0.2963087745 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006570_050 0.3018460418 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
12 Hb_003777_170 0.3022445116 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005245_070 0.3026229656 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
14 Hb_000603_010 0.3029577138 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
15 Hb_117092_010 0.3031633596 - - acyl-CoA oxidase, putative [Ricinus communis]
16 Hb_000483_090 0.3035584342 - - -
17 Hb_001922_180 0.3057819588 - - hevamine-A precursor, putative [Ricinus communis]
18 Hb_001563_020 0.3060390114 transcription factor TF Family: TRAF aberrant large forked product, putative [Ricinus communis]
19 Hb_000120_150 0.3068612072 - - hypothetical protein JCGZ_08453 [Jatropha curcas]
20 Hb_003996_030 0.3089327996 - - -

Gene co-expression network

sample Hb_092233_010 Hb_092233_010 Hb_000175_140 Hb_000175_140 Hb_092233_010--Hb_000175_140 Hb_000896_110 Hb_000896_110 Hb_092233_010--Hb_000896_110 Hb_000205_200 Hb_000205_200 Hb_092233_010--Hb_000205_200 Hb_033376_010 Hb_033376_010 Hb_092233_010--Hb_033376_010 Hb_005021_010 Hb_005021_010 Hb_092233_010--Hb_005021_010 Hb_000072_340 Hb_000072_340 Hb_092233_010--Hb_000072_340 Hb_006570_050 Hb_006570_050 Hb_000175_140--Hb_006570_050 Hb_000175_140--Hb_000896_110 Hb_000483_090 Hb_000483_090 Hb_000175_140--Hb_000483_090 Hb_117092_010 Hb_117092_010 Hb_000175_140--Hb_117092_010 Hb_001164_030 Hb_001164_030 Hb_000175_140--Hb_001164_030 Hb_005245_070 Hb_005245_070 Hb_000896_110--Hb_005245_070 Hb_001635_020 Hb_001635_020 Hb_000896_110--Hb_001635_020 Hb_003502_100 Hb_003502_100 Hb_000896_110--Hb_003502_100 Hb_001922_180 Hb_001922_180 Hb_000896_110--Hb_001922_180 Hb_000136_160 Hb_000136_160 Hb_000205_200--Hb_000136_160 Hb_000205_200--Hb_117092_010 Hb_006376_010 Hb_006376_010 Hb_000205_200--Hb_006376_010 Hb_004097_040 Hb_004097_040 Hb_000205_200--Hb_004097_040 Hb_001979_030 Hb_001979_030 Hb_000205_200--Hb_001979_030 Hb_000130_100 Hb_000130_100 Hb_033376_010--Hb_000130_100 Hb_000975_180 Hb_000975_180 Hb_033376_010--Hb_000975_180 Hb_000463_130 Hb_000463_130 Hb_033376_010--Hb_000463_130 Hb_000181_380 Hb_000181_380 Hb_033376_010--Hb_000181_380 Hb_033376_010--Hb_001922_180 Hb_021924_010 Hb_021924_010 Hb_033376_010--Hb_021924_010 Hb_029920_020 Hb_029920_020 Hb_005021_010--Hb_029920_020 Hb_000258_060 Hb_000258_060 Hb_005021_010--Hb_000258_060 Hb_000217_010 Hb_000217_010 Hb_005021_010--Hb_000217_010 Hb_002205_170 Hb_002205_170 Hb_005021_010--Hb_002205_170 Hb_001486_270 Hb_001486_270 Hb_005021_010--Hb_001486_270 Hb_000120_150 Hb_000120_150 Hb_000072_340--Hb_000120_150 Hb_000072_340--Hb_000483_090 Hb_020805_060 Hb_020805_060 Hb_000072_340--Hb_020805_060 Hb_000270_740 Hb_000270_740 Hb_000072_340--Hb_000270_740 Hb_000291_270 Hb_000291_270 Hb_000072_340--Hb_000291_270 Hb_000768_140 Hb_000768_140 Hb_000072_340--Hb_000768_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 98.891 0 2115.63 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1137.48 1781.69 380.149 86.4926 35.5358

CAGE analysis