Hb_092337_030

Information

Type -
Description -
Location Contig92337: 17337-19566
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62576: 16507-16945
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092337_030 0.0 - - -
2 Hb_028341_010 0.2647376746 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]
3 Hb_004880_140 0.2967076771 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
4 Hb_000904_080 0.2980591093 - - alpha-amylase-like protein [Vitis labrusca x Vitis vinifera]
5 Hb_078806_010 0.3039850615 - - hypothetical protein CISIN_1g031839mg [Citrus sinensis]
6 Hb_029510_070 0.3063351398 - - Cytochrome c-type biogenesis protein cycL precursor, putative [Ricinus communis]
7 Hb_000497_040 0.3085039076 - - BnaC09g09960D [Brassica napus]
8 Hb_002084_010 0.3086392809 - - hypothetical protein VITISV_017990 [Vitis vinifera]
9 Hb_001247_280 0.31077177 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
10 Hb_007441_110 0.3153365451 - - PREDICTED: F-box/LRR-repeat protein At3g58900-like [Jatropha curcas]
11 Hb_005511_100 0.3158605311 - - PREDICTED: uncharacterized protein LOC105645493 isoform X1 [Jatropha curcas]
12 Hb_025214_090 0.3172618922 - - clathrin assembly protein, putative [Ricinus communis]
13 Hb_006018_070 0.322459948 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
14 Hb_000529_210 0.322683736 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
15 Hb_000976_260 0.3228386354 - - -
16 Hb_000671_110 0.3232436294 - - hypothetical protein JCGZ_23794 [Jatropha curcas]
17 Hb_001373_110 0.3234640821 - - PREDICTED: COP9 signalosome complex subunit 8 [Jatropha curcas]
18 Hb_000710_080 0.3239483362 - - hypothetical protein EUTSA_v10023022mg [Eutrema salsugineum]
19 Hb_002007_180 0.3251564157 - - PREDICTED: uncharacterized protein LOC105647525 [Jatropha curcas]
20 Hb_003895_030 0.3275900877 - - -

Gene co-expression network

sample Hb_092337_030 Hb_092337_030 Hb_028341_010 Hb_028341_010 Hb_092337_030--Hb_028341_010 Hb_004880_140 Hb_004880_140 Hb_092337_030--Hb_004880_140 Hb_000904_080 Hb_000904_080 Hb_092337_030--Hb_000904_080 Hb_078806_010 Hb_078806_010 Hb_092337_030--Hb_078806_010 Hb_029510_070 Hb_029510_070 Hb_092337_030--Hb_029510_070 Hb_000497_040 Hb_000497_040 Hb_092337_030--Hb_000497_040 Hb_001247_280 Hb_001247_280 Hb_028341_010--Hb_001247_280 Hb_001373_110 Hb_001373_110 Hb_028341_010--Hb_001373_110 Hb_000976_260 Hb_000976_260 Hb_028341_010--Hb_000976_260 Hb_003106_080 Hb_003106_080 Hb_028341_010--Hb_003106_080 Hb_005511_100 Hb_005511_100 Hb_028341_010--Hb_005511_100 Hb_000175_090 Hb_000175_090 Hb_028341_010--Hb_000175_090 Hb_004880_140--Hb_000904_080 Hb_007441_110 Hb_007441_110 Hb_004880_140--Hb_007441_110 Hb_004228_030 Hb_004228_030 Hb_004880_140--Hb_004228_030 Hb_001437_080 Hb_001437_080 Hb_004880_140--Hb_001437_080 Hb_002272_020 Hb_002272_020 Hb_004880_140--Hb_002272_020 Hb_000307_190 Hb_000307_190 Hb_004880_140--Hb_000307_190 Hb_000904_080--Hb_000307_190 Hb_000904_080--Hb_007441_110 Hb_011512_120 Hb_011512_120 Hb_000904_080--Hb_011512_120 Hb_000904_080--Hb_004228_030 Hb_000130_240 Hb_000130_240 Hb_000904_080--Hb_000130_240 Hb_000856_380 Hb_000856_380 Hb_078806_010--Hb_000856_380 Hb_002234_100 Hb_002234_100 Hb_078806_010--Hb_002234_100 Hb_009265_070 Hb_009265_070 Hb_078806_010--Hb_009265_070 Hb_000951_100 Hb_000951_100 Hb_078806_010--Hb_000951_100 Hb_001437_150 Hb_001437_150 Hb_078806_010--Hb_001437_150 Hb_011519_010 Hb_011519_010 Hb_078806_010--Hb_011519_010 Hb_004931_070 Hb_004931_070 Hb_029510_070--Hb_004931_070 Hb_002471_150 Hb_002471_150 Hb_029510_070--Hb_002471_150 Hb_000465_460 Hb_000465_460 Hb_029510_070--Hb_000465_460 Hb_005260_020 Hb_005260_020 Hb_029510_070--Hb_005260_020 Hb_003929_250 Hb_003929_250 Hb_029510_070--Hb_003929_250 Hb_000012_220 Hb_000012_220 Hb_029510_070--Hb_000012_220 Hb_000497_040--Hb_003106_080 Hb_005488_140 Hb_005488_140 Hb_000497_040--Hb_005488_140 Hb_000497_040--Hb_000904_080 Hb_002374_010 Hb_002374_010 Hb_000497_040--Hb_002374_010 Hb_004055_170 Hb_004055_170 Hb_000497_040--Hb_004055_170 Hb_000077_320 Hb_000077_320 Hb_000497_040--Hb_000077_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.127839 0.482586 0.577945 0.0717608 0.222368 1.10688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.824575 0.175108 0.0427939 0.19328

CAGE analysis