Hb_092449_010

Information

Type -
Description -
Location Contig92449: 33-497
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092449_010 0.0 - - -
2 Hb_001277_210 0.1900542556 - - -
3 Hb_001369_260 0.2264259186 - - aldo-keto reductase, putative [Ricinus communis]
4 Hb_001016_070 0.282722813 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
5 Hb_000179_150 0.2892793365 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
6 Hb_078604_010 0.2948492973 - - -
7 Hb_003992_110 0.3044996203 - - hypothetical protein VITISV_016971 [Vitis vinifera]
8 Hb_000094_260 0.3072235521 - - conserved hypothetical protein [Ricinus communis]
9 Hb_084889_010 0.3125496331 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
10 Hb_000208_030 0.3139454106 - - -
11 Hb_007416_040 0.3167618849 - - glutamate receptor 2 plant, putative [Ricinus communis]
12 Hb_012135_010 0.3173383711 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
13 Hb_007765_120 0.3174239845 - - glycogen phosphorylase, putative [Ricinus communis]
14 Hb_000693_020 0.3224964258 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
15 Hb_128051_010 0.3285418652 - - -
16 Hb_005222_020 0.328947666 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
17 Hb_000713_020 0.3293101733 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_006816_400 0.3303054358 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
19 Hb_012324_020 0.3303271052 - - -
20 Hb_094721_010 0.3306989371 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]

Gene co-expression network

sample Hb_092449_010 Hb_092449_010 Hb_001277_210 Hb_001277_210 Hb_092449_010--Hb_001277_210 Hb_001369_260 Hb_001369_260 Hb_092449_010--Hb_001369_260 Hb_001016_070 Hb_001016_070 Hb_092449_010--Hb_001016_070 Hb_000179_150 Hb_000179_150 Hb_092449_010--Hb_000179_150 Hb_078604_010 Hb_078604_010 Hb_092449_010--Hb_078604_010 Hb_003992_110 Hb_003992_110 Hb_092449_010--Hb_003992_110 Hb_000208_030 Hb_000208_030 Hb_001277_210--Hb_000208_030 Hb_089437_010 Hb_089437_010 Hb_001277_210--Hb_089437_010 Hb_012135_010 Hb_012135_010 Hb_001277_210--Hb_012135_010 Hb_001277_210--Hb_001369_260 Hb_000260_150 Hb_000260_150 Hb_001277_210--Hb_000260_150 Hb_001369_260--Hb_003992_110 Hb_012324_020 Hb_012324_020 Hb_001369_260--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_001369_260--Hb_094721_010 Hb_020247_060 Hb_020247_060 Hb_001369_260--Hb_020247_060 Hb_003158_020 Hb_003158_020 Hb_001369_260--Hb_003158_020 Hb_000363_270 Hb_000363_270 Hb_001016_070--Hb_000363_270 Hb_001817_140 Hb_001817_140 Hb_001016_070--Hb_001817_140 Hb_001623_070 Hb_001623_070 Hb_001016_070--Hb_001623_070 Hb_011224_040 Hb_011224_040 Hb_001016_070--Hb_011224_040 Hb_000975_270 Hb_000975_270 Hb_001016_070--Hb_000975_270 Hb_186158_010 Hb_186158_010 Hb_001016_070--Hb_186158_010 Hb_084889_010 Hb_084889_010 Hb_000179_150--Hb_084889_010 Hb_133311_010 Hb_133311_010 Hb_000179_150--Hb_133311_010 Hb_109578_010 Hb_109578_010 Hb_000179_150--Hb_109578_010 Hb_009139_010 Hb_009139_010 Hb_000179_150--Hb_009139_010 Hb_000713_020 Hb_000713_020 Hb_000179_150--Hb_000713_020 Hb_001495_060 Hb_001495_060 Hb_000179_150--Hb_001495_060 Hb_015401_010 Hb_015401_010 Hb_078604_010--Hb_015401_010 Hb_012532_030 Hb_012532_030 Hb_078604_010--Hb_012532_030 Hb_086859_010 Hb_086859_010 Hb_078604_010--Hb_086859_010 Hb_056768_010 Hb_056768_010 Hb_078604_010--Hb_056768_010 Hb_029982_010 Hb_029982_010 Hb_078604_010--Hb_029982_010 Hb_004502_080 Hb_004502_080 Hb_078604_010--Hb_004502_080 Hb_145890_010 Hb_145890_010 Hb_003992_110--Hb_145890_010 Hb_000189_360 Hb_000189_360 Hb_003992_110--Hb_000189_360 Hb_002741_030 Hb_002741_030 Hb_003992_110--Hb_002741_030 Hb_003992_110--Hb_000179_150 Hb_007451_060 Hb_007451_060 Hb_003992_110--Hb_007451_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.088854 0.0860598 0 0 0.0918389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.237866 0.373775 0 0 0

CAGE analysis