Hb_092706_020

Information

Type -
Description -
Location Contig92706: 2019-4801
Sequence    

Annotation

kegg
ID rcu:RCOM_1046910
description hypothetical protein
nr
ID XP_012076923.1
description PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07403 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62735: 2190-2501 , PASA_asmbl_62736: 2815-3731
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092706_020 0.0 - - PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
2 Hb_003581_090 0.089141796 - - PREDICTED: galactose oxidase [Jatropha curcas]
3 Hb_002291_030 0.0931650963 - - PREDICTED: vesicle transport protein SFT2B [Jatropha curcas]
4 Hb_002928_110 0.1057888978 - - PREDICTED: uncharacterized protein LOC105635235 [Jatropha curcas]
5 Hb_000521_150 0.113480355 - - PREDICTED: uncharacterized protein LOC105650332 [Jatropha curcas]
6 Hb_000085_200 0.116649898 - - ATP synthase subunit H protein [Hevea brasiliensis]
7 Hb_000926_290 0.1174315778 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000412_110 0.122488552 - - Rop4 [Hevea brasiliensis]
9 Hb_002326_030 0.1236633062 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein REM16-like isoform X1 [Jatropha curcas]
10 Hb_001478_050 0.1252350996 - - PREDICTED: uncharacterized protein LOC105640307 [Jatropha curcas]
11 Hb_002529_100 0.1311539182 - - PREDICTED: DET1- and DDB1-associated protein 1 isoform X1 [Jatropha curcas]
12 Hb_003747_030 0.1325471455 - - PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like [Jatropha curcas]
13 Hb_002759_230 0.1326944134 - - PREDICTED: vacuolar protein sorting-associated protein 25 [Jatropha curcas]
14 Hb_000634_100 0.1339007599 - - hypothetical protein PRUPE_ppa013350mg [Prunus persica]
15 Hb_011609_180 0.1363962671 - - PREDICTED: uncharacterized protein DDB_G0275933-like [Citrus sinensis]
16 Hb_000329_040 0.137984644 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
17 Hb_007021_020 0.1396833278 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
18 Hb_003777_180 0.1400951067 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 isoform X1 [Jatropha curcas]
19 Hb_023386_080 0.1401524714 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
20 Hb_000260_080 0.1414099797 - - thioredoxin H-type 1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_092706_020 Hb_092706_020 Hb_003581_090 Hb_003581_090 Hb_092706_020--Hb_003581_090 Hb_002291_030 Hb_002291_030 Hb_092706_020--Hb_002291_030 Hb_002928_110 Hb_002928_110 Hb_092706_020--Hb_002928_110 Hb_000521_150 Hb_000521_150 Hb_092706_020--Hb_000521_150 Hb_000085_200 Hb_000085_200 Hb_092706_020--Hb_000085_200 Hb_000926_290 Hb_000926_290 Hb_092706_020--Hb_000926_290 Hb_003581_090--Hb_002291_030 Hb_002759_230 Hb_002759_230 Hb_003581_090--Hb_002759_230 Hb_002529_100 Hb_002529_100 Hb_003581_090--Hb_002529_100 Hb_003581_090--Hb_000926_290 Hb_001722_040 Hb_001722_040 Hb_003581_090--Hb_001722_040 Hb_002291_030--Hb_002928_110 Hb_012522_030 Hb_012522_030 Hb_002291_030--Hb_012522_030 Hb_002326_030 Hb_002326_030 Hb_002291_030--Hb_002326_030 Hb_001478_050 Hb_001478_050 Hb_002291_030--Hb_001478_050 Hb_002387_060 Hb_002387_060 Hb_002291_030--Hb_002387_060 Hb_002928_110--Hb_001478_050 Hb_002928_110--Hb_002326_030 Hb_002928_110--Hb_012522_030 Hb_012725_110 Hb_012725_110 Hb_002928_110--Hb_012725_110 Hb_003226_150 Hb_003226_150 Hb_000521_150--Hb_003226_150 Hb_000521_150--Hb_002529_100 Hb_000521_150--Hb_000926_290 Hb_000521_150--Hb_003581_090 Hb_000045_190 Hb_000045_190 Hb_000521_150--Hb_000045_190 Hb_011609_180 Hb_011609_180 Hb_000085_200--Hb_011609_180 Hb_000634_050 Hb_000634_050 Hb_000085_200--Hb_000634_050 Hb_002447_030 Hb_002447_030 Hb_000085_200--Hb_002447_030 Hb_000085_200--Hb_002529_100 Hb_000008_320 Hb_000008_320 Hb_000085_200--Hb_000008_320 Hb_000417_110 Hb_000417_110 Hb_000085_200--Hb_000417_110 Hb_000926_290--Hb_003226_150 Hb_000926_290--Hb_002529_100 Hb_000926_290--Hb_000008_320 Hb_008695_190 Hb_008695_190 Hb_000926_290--Hb_008695_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.80441 0.705965 0.826784 0.683458 1.93194 2.41979
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.57586 6.35433 4.81438 0.568888 0.101153

CAGE analysis