Hb_092855_030

Information

Type -
Description -
Location Contig92855: 3788-4990
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092855_030 0.0 - - -
2 Hb_075722_010 0.2730665752 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
3 Hb_008727_130 0.3058651156 - - hypothetical protein EUGRSUZ_J01958 [Eucalyptus grandis]
4 Hb_009557_010 0.3234952938 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
5 Hb_012650_010 0.3304729649 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
6 Hb_002019_010 0.3415507654 - - -
7 Hb_054343_010 0.3713937075 - - PREDICTED: uncharacterized protein LOC105793279 [Gossypium raimondii]
8 Hb_128193_010 0.3756064051 - - PREDICTED: uncharacterized protein LOC103699534, partial [Phoenix dactylifera]
9 Hb_001629_040 0.3935528384 - - hypothetical protein POPTR_0001s41630g [Populus trichocarpa]
10 Hb_002456_020 0.3937781684 - - Ankyrin repeat family protein [Theobroma cacao]
11 Hb_001313_010 0.3949142157 - - polyprotein [Ananas comosus]
12 Hb_000724_030 0.397930668 - - PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
13 Hb_001965_010 0.4000612749 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
14 Hb_000089_050 0.4028024596 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_000155_240 0.4039235384 - - PREDICTED: uncharacterized protein LOC104888642 [Beta vulgaris subsp. vulgaris]
16 Hb_016834_010 0.4045472582 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
17 Hb_044005_010 0.4067105249 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
18 Hb_114988_010 0.406859368 - - -
19 Hb_170193_020 0.4086053828 - - -
20 Hb_038508_010 0.408816292 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]

Gene co-expression network

sample Hb_092855_030 Hb_092855_030 Hb_075722_010 Hb_075722_010 Hb_092855_030--Hb_075722_010 Hb_008727_130 Hb_008727_130 Hb_092855_030--Hb_008727_130 Hb_009557_010 Hb_009557_010 Hb_092855_030--Hb_009557_010 Hb_012650_010 Hb_012650_010 Hb_092855_030--Hb_012650_010 Hb_002019_010 Hb_002019_010 Hb_092855_030--Hb_002019_010 Hb_054343_010 Hb_054343_010 Hb_092855_030--Hb_054343_010 Hb_000351_150 Hb_000351_150 Hb_075722_010--Hb_000351_150 Hb_056550_010 Hb_056550_010 Hb_075722_010--Hb_056550_010 Hb_038508_010 Hb_038508_010 Hb_075722_010--Hb_038508_010 Hb_000155_240 Hb_000155_240 Hb_075722_010--Hb_000155_240 Hb_087426_010 Hb_087426_010 Hb_075722_010--Hb_087426_010 Hb_000789_140 Hb_000789_140 Hb_075722_010--Hb_000789_140 Hb_008727_130--Hb_012650_010 Hb_012253_020 Hb_012253_020 Hb_008727_130--Hb_012253_020 Hb_002123_030 Hb_002123_030 Hb_008727_130--Hb_002123_030 Hb_153665_010 Hb_153665_010 Hb_008727_130--Hb_153665_010 Hb_030370_010 Hb_030370_010 Hb_008727_130--Hb_030370_010 Hb_000599_070 Hb_000599_070 Hb_008727_130--Hb_000599_070 Hb_009557_010--Hb_054343_010 Hb_128193_010 Hb_128193_010 Hb_009557_010--Hb_128193_010 Hb_171900_010 Hb_171900_010 Hb_009557_010--Hb_171900_010 Hb_023142_010 Hb_023142_010 Hb_009557_010--Hb_023142_010 Hb_001629_040 Hb_001629_040 Hb_009557_010--Hb_001629_040 Hb_000009_010 Hb_000009_010 Hb_009557_010--Hb_000009_010 Hb_002456_020 Hb_002456_020 Hb_012650_010--Hb_002456_020 Hb_020411_010 Hb_020411_010 Hb_012650_010--Hb_020411_010 Hb_016834_010 Hb_016834_010 Hb_012650_010--Hb_016834_010 Hb_012650_010--Hb_012253_020 Hb_000659_090 Hb_000659_090 Hb_012650_010--Hb_000659_090 Hb_002333_030 Hb_002333_030 Hb_002019_010--Hb_002333_030 Hb_001313_010 Hb_001313_010 Hb_002019_010--Hb_001313_010 Hb_000089_150 Hb_000089_150 Hb_002019_010--Hb_000089_150 Hb_007467_020 Hb_007467_020 Hb_002019_010--Hb_007467_020 Hb_000724_030 Hb_000724_030 Hb_002019_010--Hb_000724_030 Hb_054343_010--Hb_171900_010 Hb_138607_010 Hb_138607_010 Hb_054343_010--Hb_138607_010 Hb_054343_010--Hb_023142_010 Hb_054343_010--Hb_128193_010 Hb_000159_030 Hb_000159_030 Hb_054343_010--Hb_000159_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.806009 0 0 0 0 0.35298
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.793583 0.508501

CAGE analysis