Hb_092995_020

Information

Type -
Description -
Location Contig92995: 3866-4510
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_092995_020 0.0 - - -
2 Hb_001242_010 0.2284189431 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
3 Hb_001549_030 0.232696768 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_007125_010 0.2822304388 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_121461_020 0.3057622759 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_003050_030 0.3166461222 - - Calcyclin-binding protein, putative [Ricinus communis]
7 Hb_000143_020 0.3208202731 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
8 Hb_083845_010 0.3306193604 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
9 Hb_009732_040 0.3394312627 - - hypothetical protein POPTR_0006s04880g [Populus trichocarpa]
10 Hb_000110_390 0.3433278184 - - PREDICTED: uncharacterized protein LOC103338992 [Prunus mume]
11 Hb_000816_270 0.3505940097 - - -
12 Hb_022276_020 0.3593394403 - - -
13 Hb_000922_010 0.3695304117 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
14 Hb_000455_100 0.372853099 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
15 Hb_010377_020 0.3773203615 - - -
16 Hb_020712_050 0.3829958242 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1-like [Jatropha curcas]
17 Hb_188303_010 0.3844213044 - - Disease resistance protein RFL1, putative [Ricinus communis]
18 Hb_006683_010 0.3870030272 - - cell wall invertase [Manihot esculenta]
19 Hb_001268_320 0.3887926857 - - PREDICTED: uncharacterized protein LOC104887816 [Beta vulgaris subsp. vulgaris]
20 Hb_001901_040 0.3899858006 - - hypothetical protein CARUB_v10027638mg [Capsella rubella]

Gene co-expression network

sample Hb_092995_020 Hb_092995_020 Hb_001242_010 Hb_001242_010 Hb_092995_020--Hb_001242_010 Hb_001549_030 Hb_001549_030 Hb_092995_020--Hb_001549_030 Hb_007125_010 Hb_007125_010 Hb_092995_020--Hb_007125_010 Hb_121461_020 Hb_121461_020 Hb_092995_020--Hb_121461_020 Hb_003050_030 Hb_003050_030 Hb_092995_020--Hb_003050_030 Hb_000143_020 Hb_000143_020 Hb_092995_020--Hb_000143_020 Hb_010377_020 Hb_010377_020 Hb_001242_010--Hb_010377_020 Hb_000110_390 Hb_000110_390 Hb_001242_010--Hb_000110_390 Hb_001268_320 Hb_001268_320 Hb_001242_010--Hb_001268_320 Hb_001242_010--Hb_003050_030 Hb_020712_050 Hb_020712_050 Hb_001242_010--Hb_020712_050 Hb_001549_030--Hb_007125_010 Hb_002184_100 Hb_002184_100 Hb_001549_030--Hb_002184_100 Hb_001549_030--Hb_001242_010 Hb_001549_030--Hb_121461_020 Hb_009732_030 Hb_009732_030 Hb_001549_030--Hb_009732_030 Hb_009615_080 Hb_009615_080 Hb_007125_010--Hb_009615_080 Hb_006683_010 Hb_006683_010 Hb_007125_010--Hb_006683_010 Hb_127993_010 Hb_127993_010 Hb_007125_010--Hb_127993_010 Hb_054362_010 Hb_054362_010 Hb_007125_010--Hb_054362_010 Hb_169574_010 Hb_169574_010 Hb_007125_010--Hb_169574_010 Hb_022276_020 Hb_022276_020 Hb_121461_020--Hb_022276_020 Hb_162557_010 Hb_162557_010 Hb_121461_020--Hb_162557_010 Hb_000922_010 Hb_000922_010 Hb_121461_020--Hb_000922_010 Hb_009732_040 Hb_009732_040 Hb_121461_020--Hb_009732_040 Hb_002849_150 Hb_002849_150 Hb_121461_020--Hb_002849_150 Hb_003392_030 Hb_003392_030 Hb_121461_020--Hb_003392_030 Hb_002301_110 Hb_002301_110 Hb_003050_030--Hb_002301_110 Hb_000032_460 Hb_000032_460 Hb_003050_030--Hb_000032_460 Hb_003878_220 Hb_003878_220 Hb_003050_030--Hb_003878_220 Hb_001472_110 Hb_001472_110 Hb_003050_030--Hb_001472_110 Hb_007975_050 Hb_007975_050 Hb_003050_030--Hb_007975_050 Hb_010931_020 Hb_010931_020 Hb_000143_020--Hb_010931_020 Hb_026650_010 Hb_026650_010 Hb_000143_020--Hb_026650_010 Hb_032621_010 Hb_032621_010 Hb_000143_020--Hb_032621_010 Hb_000143_020--Hb_003392_030 Hb_000012_040 Hb_000012_040 Hb_000143_020--Hb_000012_040 Hb_000143_020--Hb_162557_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.136719 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.138486 0.227226 0

CAGE analysis