Hb_093385_010

Information

Type -
Description -
Location Contig93385: 1693-1991
Sequence    

Annotation

kegg
ID pxb:103954150
description probable mannitol dehydrogenase
nr
ID XP_009364227.1
description PREDICTED: probable mannitol dehydrogenase [Pyrus x bretschneideri]
swissprot
ID Q9ZRF1
description Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1
trembl
ID B9T7R7
description Alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_0366700 PE=3 SV=1
Gene Ontology
ID GO:0008270
description probable mannitol dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093385_010 0.0 - - PREDICTED: probable mannitol dehydrogenase [Pyrus x bretschneideri]
2 Hb_000406_010 0.1463857938 - - PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas]
3 Hb_002343_030 0.1887974262 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000988_010 0.2048810055 - - hypothetical protein POPTR_0004s17730g [Populus trichocarpa]
5 Hb_000039_080 0.207920403 - - cyclin d, putative [Ricinus communis]
6 Hb_000105_110 0.2097466617 - - hypothetical protein, partial [Fervidibacteria bacterium SCGC AAA471-D06]
7 Hb_187739_010 0.2127137862 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
8 Hb_045985_010 0.224554346 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
9 Hb_003032_060 0.2263834493 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
10 Hb_000413_150 0.2358008631 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]
11 Hb_000197_170 0.2378944398 - - ATP binding protein, putative [Ricinus communis]
12 Hb_000107_260 0.2403501297 - - -
13 Hb_006615_110 0.2433446 transcription factor TF Family: bZIP hypothetical protein JCGZ_11777 [Jatropha curcas]
14 Hb_047560_010 0.2434752861 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
15 Hb_130739_010 0.248242966 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
16 Hb_019733_020 0.2517610129 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
17 Hb_000302_070 0.2518369233 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
18 Hb_011826_010 0.2566820036 - - Disease resistance protein RPM1, putative [Ricinus communis]
19 Hb_000977_200 0.2570135862 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Jatropha curcas]
20 Hb_005601_030 0.2577366045 - - organic anion transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_093385_010 Hb_093385_010 Hb_000406_010 Hb_000406_010 Hb_093385_010--Hb_000406_010 Hb_002343_030 Hb_002343_030 Hb_093385_010--Hb_002343_030 Hb_000988_010 Hb_000988_010 Hb_093385_010--Hb_000988_010 Hb_000039_080 Hb_000039_080 Hb_093385_010--Hb_000039_080 Hb_000105_110 Hb_000105_110 Hb_093385_010--Hb_000105_110 Hb_187739_010 Hb_187739_010 Hb_093385_010--Hb_187739_010 Hb_188411_010 Hb_188411_010 Hb_000406_010--Hb_188411_010 Hb_133605_010 Hb_133605_010 Hb_000406_010--Hb_133605_010 Hb_000413_150 Hb_000413_150 Hb_000406_010--Hb_000413_150 Hb_000406_010--Hb_002343_030 Hb_000197_170 Hb_000197_170 Hb_000406_010--Hb_000197_170 Hb_002343_030--Hb_000105_110 Hb_000808_120 Hb_000808_120 Hb_002343_030--Hb_000808_120 Hb_005601_030 Hb_005601_030 Hb_002343_030--Hb_005601_030 Hb_053073_010 Hb_053073_010 Hb_002343_030--Hb_053073_010 Hb_006615_110 Hb_006615_110 Hb_000988_010--Hb_006615_110 Hb_045985_010 Hb_045985_010 Hb_000988_010--Hb_045985_010 Hb_000988_010--Hb_187739_010 Hb_019733_020 Hb_019733_020 Hb_000988_010--Hb_019733_020 Hb_002675_210 Hb_002675_210 Hb_000988_010--Hb_002675_210 Hb_001518_050 Hb_001518_050 Hb_000988_010--Hb_001518_050 Hb_000483_120 Hb_000483_120 Hb_000039_080--Hb_000483_120 Hb_012016_050 Hb_012016_050 Hb_000039_080--Hb_012016_050 Hb_179367_020 Hb_179367_020 Hb_000039_080--Hb_179367_020 Hb_000908_030 Hb_000908_030 Hb_000039_080--Hb_000908_030 Hb_177179_020 Hb_177179_020 Hb_000039_080--Hb_177179_020 Hb_011826_010 Hb_011826_010 Hb_000039_080--Hb_011826_010 Hb_000723_070 Hb_000723_070 Hb_000105_110--Hb_000723_070 Hb_000302_070 Hb_000302_070 Hb_000105_110--Hb_000302_070 Hb_000105_110--Hb_005601_030 Hb_007617_040 Hb_007617_040 Hb_000105_110--Hb_007617_040 Hb_172983_010 Hb_172983_010 Hb_187739_010--Hb_172983_010 Hb_002163_070 Hb_002163_070 Hb_187739_010--Hb_002163_070 Hb_010252_010 Hb_010252_010 Hb_187739_010--Hb_010252_010 Hb_009083_020 Hb_009083_020 Hb_187739_010--Hb_009083_020 Hb_160950_010 Hb_160950_010 Hb_187739_010--Hb_160950_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.623263 0.856507 2.58433 3.83105 0.617167 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis