Hb_093458_040

Information

Type -
Description -
Location Contig93458: 43689-64227
Sequence    

Annotation

kegg
ID rcu:RCOM_1020360
description hypothetical protein
nr
ID XP_012071168.1
description PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
swissprot
ID Q69ZF3
description Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=1 SV=2
trembl
ID A0A067KWM5
description Non-lysosomal glucosylceramidase OS=Jatropha curcas GN=JCGZ_01145 PE=3 SV=1
Gene Ontology
ID GO:0016021
description non-lysosomal glucosylceramidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62961: 44339-46975 , PASA_asmbl_62962: 47400-50593 , PASA_asmbl_62964: 61885-64181
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093458_040 0.0 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
2 Hb_002849_130 0.0497080707 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
3 Hb_006831_140 0.0501462956 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
4 Hb_002989_020 0.0504221773 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
5 Hb_000340_530 0.0537705815 - - hypothetical protein VITISV_016664 [Vitis vinifera]
6 Hb_000976_140 0.0542481967 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
7 Hb_000260_350 0.0549152526 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001500_140 0.0558153912 - - pelota, putative [Ricinus communis]
9 Hb_011063_050 0.0561851934 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17670 [Jatropha curcas]
10 Hb_004990_010 0.0567262263 - - PREDICTED: BTB/POZ and MATH domain-containing protein 4 [Jatropha curcas]
11 Hb_003428_010 0.0589835152 - - PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Jatropha curcas]
12 Hb_001408_140 0.0591963571 - - hypothetical protein JCGZ_00234 [Jatropha curcas]
13 Hb_000140_290 0.0595033796 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Populus euphratica]
14 Hb_002028_210 0.0598238931 - - PREDICTED: uncharacterized protein LOC105638038 [Jatropha curcas]
15 Hb_013399_020 0.0600453348 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
16 Hb_001359_050 0.0603374123 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005730_040 0.0611439445 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
18 Hb_001473_160 0.0617800254 - - Vesicle-associated membrane protein, putative [Ricinus communis]
19 Hb_000708_030 0.0625769798 - - PREDICTED: uncharacterized protein LOC105650742 [Jatropha curcas]
20 Hb_000313_220 0.0628126158 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_093458_040 Hb_093458_040 Hb_002849_130 Hb_002849_130 Hb_093458_040--Hb_002849_130 Hb_006831_140 Hb_006831_140 Hb_093458_040--Hb_006831_140 Hb_002989_020 Hb_002989_020 Hb_093458_040--Hb_002989_020 Hb_000340_530 Hb_000340_530 Hb_093458_040--Hb_000340_530 Hb_000976_140 Hb_000976_140 Hb_093458_040--Hb_000976_140 Hb_000260_350 Hb_000260_350 Hb_093458_040--Hb_000260_350 Hb_000313_220 Hb_000313_220 Hb_002849_130--Hb_000313_220 Hb_002849_130--Hb_000976_140 Hb_005730_040 Hb_005730_040 Hb_002849_130--Hb_005730_040 Hb_003428_010 Hb_003428_010 Hb_002849_130--Hb_003428_010 Hb_015807_050 Hb_015807_050 Hb_002849_130--Hb_015807_050 Hb_000708_030 Hb_000708_030 Hb_006831_140--Hb_000708_030 Hb_000078_120 Hb_000078_120 Hb_006831_140--Hb_000078_120 Hb_001876_050 Hb_001876_050 Hb_006831_140--Hb_001876_050 Hb_001021_150 Hb_001021_150 Hb_006831_140--Hb_001021_150 Hb_002078_350 Hb_002078_350 Hb_006831_140--Hb_002078_350 Hb_002989_020--Hb_000340_530 Hb_011063_050 Hb_011063_050 Hb_002989_020--Hb_011063_050 Hb_010142_020 Hb_010142_020 Hb_002989_020--Hb_010142_020 Hb_000477_050 Hb_000477_050 Hb_002989_020--Hb_000477_050 Hb_001679_050 Hb_001679_050 Hb_002989_020--Hb_001679_050 Hb_000340_530--Hb_011063_050 Hb_000340_530--Hb_001679_050 Hb_000116_450 Hb_000116_450 Hb_000340_530--Hb_000116_450 Hb_004109_080 Hb_004109_080 Hb_000340_530--Hb_004109_080 Hb_000976_140--Hb_005730_040 Hb_000976_140--Hb_000313_220 Hb_000976_140--Hb_015807_050 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090 Hb_001511_060 Hb_001511_060 Hb_000260_350--Hb_001511_060 Hb_000349_260 Hb_000349_260 Hb_000260_350--Hb_000349_260 Hb_004990_010 Hb_004990_010 Hb_000260_350--Hb_004990_010 Hb_005054_110 Hb_005054_110 Hb_000260_350--Hb_005054_110 Hb_168978_010 Hb_168978_010 Hb_000260_350--Hb_168978_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.16875 7.94545 7.50059 9.83457 6.51323 7.35888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.06793 8.36917 7.5068 8.66252 7.36114

CAGE analysis