Hb_093458_050

Information

Type -
Description -
Location Contig93458: 69273-78814
Sequence    

Annotation

kegg
ID tcc:TCM_020353
description Glutathione-disulfide reductase isoform 1
nr
ID ADE06225.1
description glutathione reductase [Hevea brasiliensis]
swissprot
ID Q43621
description Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1
trembl
ID D5LPR3
description Glutathione reductase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005777
description glutathione cytosolic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62965: 69268-78671
cDNA
(Sanger)
(ID:Location)		 044_L08.ab1: 69268-72737

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093458_050 0.0 - - glutathione reductase [Hevea brasiliensis]
2 Hb_011953_020 0.075198634 - - PREDICTED: ORM1-like protein 1 [Jatropha curcas]
3 Hb_003551_050 0.0772162489 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
4 Hb_000922_390 0.0988541194 - - PREDICTED: uncharacterized protein LOC105640364 [Jatropha curcas]
5 Hb_002600_040 0.0989836199 - - PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Jatropha curcas]
6 Hb_001519_030 0.106606355 - - PREDICTED: protein trichome birefringence-like 12 isoform X1 [Jatropha curcas]
7 Hb_002239_060 0.108975116 - - PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas]
8 Hb_000424_210 0.1112930759 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
9 Hb_003581_260 0.1118899139 - - PREDICTED: vacuolar protein sorting-associated protein 29-like [Jatropha curcas]
10 Hb_007181_070 0.1144422602 - - PREDICTED: alpha-galactosidase-like [Jatropha curcas]
11 Hb_004056_030 0.1179253662 - - hypothetical protein 33 [Hevea brasiliensis]
12 Hb_048476_050 0.1180755556 - - semialdehyde dehydrogenase family protein [Populus trichocarpa]
13 Hb_001481_140 0.1214820838 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
14 Hb_012291_030 0.1218230013 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X3 [Populus euphratica]
15 Hb_001811_030 0.1230165183 - - Beta-ureidopropionase, putative [Ricinus communis]
16 Hb_031862_110 0.1232745962 - - calcium-dependent protein kinase [Hevea brasiliensis]
17 Hb_001159_080 0.1261812438 - - hypothetical protein JCGZ_20745 [Jatropha curcas]
18 Hb_002005_020 0.1271772585 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002301_230 0.1277464396 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
20 Hb_000976_360 0.1279332419 - - PREDICTED: uncharacterized protein LOC105646237 [Jatropha curcas]

Gene co-expression network

sample Hb_093458_050 Hb_093458_050 Hb_011953_020 Hb_011953_020 Hb_093458_050--Hb_011953_020 Hb_003551_050 Hb_003551_050 Hb_093458_050--Hb_003551_050 Hb_000922_390 Hb_000922_390 Hb_093458_050--Hb_000922_390 Hb_002600_040 Hb_002600_040 Hb_093458_050--Hb_002600_040 Hb_001519_030 Hb_001519_030 Hb_093458_050--Hb_001519_030 Hb_002239_060 Hb_002239_060 Hb_093458_050--Hb_002239_060 Hb_002005_020 Hb_002005_020 Hb_011953_020--Hb_002005_020 Hb_029866_020 Hb_029866_020 Hb_011953_020--Hb_029866_020 Hb_011953_020--Hb_003551_050 Hb_001519_050 Hb_001519_050 Hb_011953_020--Hb_001519_050 Hb_011953_020--Hb_001519_030 Hb_000976_360 Hb_000976_360 Hb_003551_050--Hb_000976_360 Hb_031862_110 Hb_031862_110 Hb_003551_050--Hb_031862_110 Hb_002603_160 Hb_002603_160 Hb_003551_050--Hb_002603_160 Hb_000753_130 Hb_000753_130 Hb_003551_050--Hb_000753_130 Hb_011671_450 Hb_011671_450 Hb_000922_390--Hb_011671_450 Hb_001811_030 Hb_001811_030 Hb_000922_390--Hb_001811_030 Hb_009193_030 Hb_009193_030 Hb_000922_390--Hb_009193_030 Hb_000922_390--Hb_002600_040 Hb_000820_090 Hb_000820_090 Hb_000922_390--Hb_000820_090 Hb_012291_030 Hb_012291_030 Hb_002600_040--Hb_012291_030 Hb_002660_070 Hb_002660_070 Hb_002600_040--Hb_002660_070 Hb_002600_040--Hb_001519_030 Hb_002600_040--Hb_011953_020 Hb_001481_140 Hb_001481_140 Hb_001519_030--Hb_001481_140 Hb_006569_100 Hb_006569_100 Hb_001519_030--Hb_006569_100 Hb_001005_080 Hb_001005_080 Hb_001519_030--Hb_001005_080 Hb_005527_040 Hb_005527_040 Hb_001519_030--Hb_005527_040 Hb_000817_030 Hb_000817_030 Hb_001519_030--Hb_000817_030 Hb_001904_090 Hb_001904_090 Hb_001519_030--Hb_001904_090 Hb_002239_060--Hb_001481_140 Hb_002742_090 Hb_002742_090 Hb_002239_060--Hb_002742_090 Hb_003581_260 Hb_003581_260 Hb_002239_060--Hb_003581_260 Hb_001008_090 Hb_001008_090 Hb_002239_060--Hb_001008_090 Hb_000530_070 Hb_000530_070 Hb_002239_060--Hb_000530_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.916 5.70326 9.03381 23.4346 21.3283 18.4421
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
56.0419 50.3491 87.2965 36.2576 13.156

CAGE analysis