Hb_093543_010

Information

Type -
Description -
Location Contig93543: 63-992
Sequence    

Annotation

kegg
ID cmo:103496653
description uncharacterized LOC103496653
nr
ID XP_012092566.1
description PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0NAW6
description Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like protein OS=Gossypium arboreum GN=F383_13104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093543_010 0.0 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
2 Hb_012707_020 0.2072010253 - - -
3 Hb_006615_210 0.2243352364 - - PREDICTED: uncharacterized protein LOC105640677 isoform X2 [Jatropha curcas]
4 Hb_000261_300 0.2650617291 - - -
5 Hb_000028_380 0.2737941052 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
6 Hb_008305_010 0.2765046005 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_056506_080 0.2994722209 - - PREDICTED: uncharacterized protein LOC104888944 [Beta vulgaris subsp. vulgaris]
8 Hb_008755_020 0.3001775159 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_006120_160 0.3003378654 - - -
10 Hb_101034_010 0.3012093773 - - -
11 Hb_002450_170 0.3012653853 transcription factor TF Family: FAR1 Protein FAR1-RELATED SEQUENCE 5 [Glycine soja]
12 Hb_179183_010 0.3015533794 - - RALF-LIKE 32 family protein [Populus trichocarpa]
13 Hb_005432_020 0.3020677166 - - -
14 Hb_181013_010 0.3030931463 - - PREDICTED: uncharacterized protein LOC105629028 [Jatropha curcas]
15 Hb_000142_090 0.3040055622 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
16 Hb_017687_010 0.3046194478 - - retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group]
17 Hb_159124_010 0.3051516096 - - PREDICTED: uncharacterized protein LOC103332224 [Prunus mume]
18 Hb_134377_070 0.3057741044 - - -
19 Hb_013420_070 0.3067826015 - - hypothetical protein EUGRSUZ_I01852 [Eucalyptus grandis]
20 Hb_007749_030 0.3078249965 - - -

Gene co-expression network

sample Hb_093543_010 Hb_093543_010 Hb_012707_020 Hb_012707_020 Hb_093543_010--Hb_012707_020 Hb_006615_210 Hb_006615_210 Hb_093543_010--Hb_006615_210 Hb_000261_300 Hb_000261_300 Hb_093543_010--Hb_000261_300 Hb_000028_380 Hb_000028_380 Hb_093543_010--Hb_000028_380 Hb_008305_010 Hb_008305_010 Hb_093543_010--Hb_008305_010 Hb_056506_080 Hb_056506_080 Hb_093543_010--Hb_056506_080 Hb_012707_020--Hb_000261_300 Hb_012707_020--Hb_006615_210 Hb_006717_080 Hb_006717_080 Hb_012707_020--Hb_006717_080 Hb_040473_010 Hb_040473_010 Hb_012707_020--Hb_040473_010 Hb_012717_030 Hb_012717_030 Hb_012707_020--Hb_012717_030 Hb_006615_210--Hb_000261_300 Hb_001355_050 Hb_001355_050 Hb_006615_210--Hb_001355_050 Hb_003927_020 Hb_003927_020 Hb_006615_210--Hb_003927_020 Hb_011218_030 Hb_011218_030 Hb_006615_210--Hb_011218_030 Hb_001946_130 Hb_001946_130 Hb_006615_210--Hb_001946_130 Hb_022256_070 Hb_022256_070 Hb_000261_300--Hb_022256_070 Hb_000261_300--Hb_006717_080 Hb_000527_120 Hb_000527_120 Hb_000261_300--Hb_000527_120 Hb_000375_250 Hb_000375_250 Hb_000261_300--Hb_000375_250 Hb_000028_380--Hb_040473_010 Hb_013420_070 Hb_013420_070 Hb_000028_380--Hb_013420_070 Hb_001496_050 Hb_001496_050 Hb_000028_380--Hb_001496_050 Hb_000968_070 Hb_000968_070 Hb_000028_380--Hb_000968_070 Hb_001320_020 Hb_001320_020 Hb_000028_380--Hb_001320_020 Hb_007885_110 Hb_007885_110 Hb_000028_380--Hb_007885_110 Hb_000011_470 Hb_000011_470 Hb_008305_010--Hb_000011_470 Hb_013420_040 Hb_013420_040 Hb_008305_010--Hb_013420_040 Hb_121041_010 Hb_121041_010 Hb_008305_010--Hb_121041_010 Hb_000627_020 Hb_000627_020 Hb_008305_010--Hb_000627_020 Hb_158203_010 Hb_158203_010 Hb_008305_010--Hb_158203_010 Hb_183191_020 Hb_183191_020 Hb_008305_010--Hb_183191_020 Hb_006120_160 Hb_006120_160 Hb_056506_080--Hb_006120_160 Hb_008755_020 Hb_008755_020 Hb_056506_080--Hb_008755_020 Hb_101034_010 Hb_101034_010 Hb_056506_080--Hb_101034_010 Hb_005432_020 Hb_005432_020 Hb_056506_080--Hb_005432_020 Hb_181013_010 Hb_181013_010 Hb_056506_080--Hb_181013_010 Hb_000142_090 Hb_000142_090 Hb_056506_080--Hb_000142_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0525568 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0599318 0 0 0.057062 0.190822

CAGE analysis