Hb_094437_040

Information

Type -
Description -
Location Contig94437: 7540-8331
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa008553mg
description hypothetical protein
nr
ID AIU50756.1
description ankyrin repeat family protein, partial [Manihot esculenta]
swissprot
ID -
description -
trembl
ID A0A097PRS7
description Ankyrin repeat family protein (Fragment) OS=Manihot esculenta PE=2 SV=1
Gene Ontology
ID GO:0008168
description ankyrin repeat family partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094437_040 0.0 - - ankyrin repeat family protein, partial [Manihot esculenta]
2 Hb_002611_030 0.1712528774 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
3 Hb_041025_010 0.1945154094 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
4 Hb_183522_010 0.1951822469 - - Far upstream element-binding protein, putative [Ricinus communis]
5 Hb_114079_010 0.2076918895 - - hypothetical protein CICLE_v10008147mg [Citrus clementina]
6 Hb_003642_020 0.2101798632 - - chlorophyll(ide) b reductase, partial [Pyrus x bretschneideri]
7 Hb_006422_030 0.211061002 - - -
8 Hb_054541_010 0.2136796076 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
9 Hb_017014_020 0.2200281872 - - -
10 Hb_000053_030 0.2202127751 - - hypothetical protein CISIN_1g0010393mg, partial [Citrus sinensis]
11 Hb_000082_020 0.2207728942 - - -
12 Hb_003030_040 0.2268058907 - - hypothetical protein CISIN_1g0466212mg, partial [Citrus sinensis]
13 Hb_005129_010 0.2270031979 - - hypothetical protein VITISV_026364 [Vitis vinifera]
14 Hb_060391_010 0.2273242295 - - nucleic acid binding protein, putative [Ricinus communis]
15 Hb_060458_010 0.2291306775 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000033_070 0.2295480314 - - unnamed protein product [Oryza sativa Japonica Group]
17 Hb_004724_470 0.2326879921 - - Nitrilase, putative [Ricinus communis]
18 Hb_033385_010 0.2344729622 - - hypothetical protein JCGZ_06094 [Jatropha curcas]
19 Hb_009083_030 0.2347221069 - - hypothetical protein POPTR_0007s14760g [Populus trichocarpa]
20 Hb_017014_010 0.2368619434 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_094437_040 Hb_094437_040 Hb_002611_030 Hb_002611_030 Hb_094437_040--Hb_002611_030 Hb_041025_010 Hb_041025_010 Hb_094437_040--Hb_041025_010 Hb_183522_010 Hb_183522_010 Hb_094437_040--Hb_183522_010 Hb_114079_010 Hb_114079_010 Hb_094437_040--Hb_114079_010 Hb_003642_020 Hb_003642_020 Hb_094437_040--Hb_003642_020 Hb_006422_030 Hb_006422_030 Hb_094437_040--Hb_006422_030 Hb_017014_010 Hb_017014_010 Hb_002611_030--Hb_017014_010 Hb_100137_010 Hb_100137_010 Hb_002611_030--Hb_100137_010 Hb_004466_060 Hb_004466_060 Hb_002611_030--Hb_004466_060 Hb_048702_010 Hb_048702_010 Hb_002611_030--Hb_048702_010 Hb_009083_030 Hb_009083_030 Hb_002611_030--Hb_009083_030 Hb_010003_010 Hb_010003_010 Hb_002611_030--Hb_010003_010 Hb_000082_020 Hb_000082_020 Hb_041025_010--Hb_000082_020 Hb_046120_010 Hb_046120_010 Hb_041025_010--Hb_046120_010 Hb_041025_010--Hb_114079_010 Hb_041025_010--Hb_183522_010 Hb_010964_020 Hb_010964_020 Hb_041025_010--Hb_010964_020 Hb_169505_010 Hb_169505_010 Hb_041025_010--Hb_169505_010 Hb_007083_020 Hb_007083_020 Hb_183522_010--Hb_007083_020 Hb_106415_010 Hb_106415_010 Hb_183522_010--Hb_106415_010 Hb_183522_010--Hb_114079_010 Hb_183522_010--Hb_010964_020 Hb_000053_030 Hb_000053_030 Hb_183522_010--Hb_000053_030 Hb_005107_020 Hb_005107_020 Hb_183522_010--Hb_005107_020 Hb_114079_010--Hb_000082_020 Hb_003030_040 Hb_003030_040 Hb_114079_010--Hb_003030_040 Hb_025905_020 Hb_025905_020 Hb_114079_010--Hb_025905_020 Hb_114079_010--Hb_010964_020 Hb_002079_040 Hb_002079_040 Hb_003642_020--Hb_002079_040 Hb_008206_090 Hb_008206_090 Hb_003642_020--Hb_008206_090 Hb_003642_020--Hb_048702_010 Hb_003642_020--Hb_002611_030 Hb_001059_140 Hb_001059_140 Hb_003642_020--Hb_001059_140 Hb_005271_230 Hb_005271_230 Hb_006422_030--Hb_005271_230 Hb_060458_010 Hb_060458_010 Hb_006422_030--Hb_060458_010 Hb_060391_010 Hb_060391_010 Hb_006422_030--Hb_060391_010 Hb_050034_010 Hb_050034_010 Hb_006422_030--Hb_050034_010 Hb_006422_030--Hb_001059_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.73292 0.183223 1.96754 10.6899 0.72314 9.67786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.734331 0.192332 0.297162 1.35144 2.27716

CAGE analysis