Hb_094637_010

Information

Type -
Description -
Location Contig94637: 2232-4760
Sequence    

Annotation

kegg
ID tcc:TCM_009668
description Adenine nucleotide alpha hydrolases-like superfamily protein, putative
nr
ID XP_012082107.1
description PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
swissprot
ID Q8LGG8
description Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2
trembl
ID A0A067KC59
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18345 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094637_010 0.0 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
2 Hb_008140_060 0.0690779429 - - Cytochrome P450, putative [Theobroma cacao]
3 Hb_000934_290 0.0937370851 - - conserved hypothetical protein [Ricinus communis]
4 Hb_009581_050 0.1021556805 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
5 Hb_001638_110 0.1098376354 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000000_060 0.1132324811 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
7 Hb_039496_010 0.1151497642 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
8 Hb_008001_020 0.1194941647 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
9 Hb_134017_010 0.1195779994 - - kinase, putative [Ricinus communis]
10 Hb_000844_100 0.1230352387 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
11 Hb_003439_090 0.1244682998 - - kinase, putative [Ricinus communis]
12 Hb_002007_140 0.1251897807 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like [Populus euphratica]
13 Hb_001158_080 0.1268280457 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
14 Hb_000407_080 0.1272143826 - - 1-aminocyclopropane-1-carboxylate oxidase [Hevea brasiliensis]
15 Hb_010326_030 0.1283388155 - - PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
16 Hb_003788_010 0.1304386381 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
17 Hb_012807_060 0.13061893 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_130967_010 0.13124272 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_002551_090 0.1312702149 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
20 Hb_013914_020 0.1319923845 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]

Gene co-expression network

sample Hb_094637_010 Hb_094637_010 Hb_008140_060 Hb_008140_060 Hb_094637_010--Hb_008140_060 Hb_000934_290 Hb_000934_290 Hb_094637_010--Hb_000934_290 Hb_009581_050 Hb_009581_050 Hb_094637_010--Hb_009581_050 Hb_001638_110 Hb_001638_110 Hb_094637_010--Hb_001638_110 Hb_000000_060 Hb_000000_060 Hb_094637_010--Hb_000000_060 Hb_039496_010 Hb_039496_010 Hb_094637_010--Hb_039496_010 Hb_008140_060--Hb_000934_290 Hb_000844_100 Hb_000844_100 Hb_008140_060--Hb_000844_100 Hb_001158_080 Hb_001158_080 Hb_008140_060--Hb_001158_080 Hb_088916_010 Hb_088916_010 Hb_008140_060--Hb_088916_010 Hb_002551_090 Hb_002551_090 Hb_008140_060--Hb_002551_090 Hb_003788_010 Hb_003788_010 Hb_000934_290--Hb_003788_010 Hb_000934_290--Hb_039496_010 Hb_000934_290--Hb_001158_080 Hb_003787_060 Hb_003787_060 Hb_000934_290--Hb_003787_060 Hb_000407_080 Hb_000407_080 Hb_009581_050--Hb_000407_080 Hb_012807_060 Hb_012807_060 Hb_009581_050--Hb_012807_060 Hb_002007_140 Hb_002007_140 Hb_009581_050--Hb_002007_140 Hb_003807_020 Hb_003807_020 Hb_009581_050--Hb_003807_020 Hb_000335_050 Hb_000335_050 Hb_009581_050--Hb_000335_050 Hb_003430_020 Hb_003430_020 Hb_009581_050--Hb_003430_020 Hb_019229_020 Hb_019229_020 Hb_001638_110--Hb_019229_020 Hb_000238_060 Hb_000238_060 Hb_001638_110--Hb_000238_060 Hb_005228_170 Hb_005228_170 Hb_001638_110--Hb_005228_170 Hb_002671_110 Hb_002671_110 Hb_001638_110--Hb_002671_110 Hb_000852_050 Hb_000852_050 Hb_001638_110--Hb_000852_050 Hb_000649_030 Hb_000649_030 Hb_001638_110--Hb_000649_030 Hb_001104_280 Hb_001104_280 Hb_000000_060--Hb_001104_280 Hb_000000_060--Hb_019229_020 Hb_000000_060--Hb_001638_110 Hb_000000_060--Hb_002007_140 Hb_000045_180 Hb_000045_180 Hb_000000_060--Hb_000045_180 Hb_039496_010--Hb_003787_060 Hb_003805_080 Hb_003805_080 Hb_039496_010--Hb_003805_080 Hb_000963_010 Hb_000963_010 Hb_039496_010--Hb_000963_010 Hb_028008_030 Hb_028008_030 Hb_039496_010--Hb_028008_030 Hb_039496_010--Hb_003788_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.63599 0.191356 2.00973 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.15963 0.511579

CAGE analysis