Hb_094730_010

Information

Type -
Description -
Location Contig94730: 35-211
Sequence    

Annotation

kegg
ID tcc:TCM_033969
description Uncharacterized protein isoform 1
nr
ID KDP38449.1
description hypothetical protein JCGZ_04374 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2W4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04374 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094730_010 0.0 - - hypothetical protein JCGZ_04374 [Jatropha curcas]
2 Hb_004241_220 0.0341560107 - - -
3 Hb_000375_270 0.1305992125 - - -
4 Hb_003549_060 0.1784363752 - - PREDICTED: importin subunit alpha-1a-like isoform X3 [Gossypium raimondii]
5 Hb_000680_040 0.1785315168 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
6 Hb_109358_010 0.192257543 - - -
7 Hb_148146_030 0.2413205401 - - PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]
8 Hb_000006_020 0.2464403362 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000015_240 0.2464403362 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000016_090 0.2464403362 - - -
11 Hb_000016_240 0.2464403362 transcription factor TF Family: LOB hypothetical protein POPTR_0012s13910g [Populus trichocarpa]
12 Hb_000028_020 0.2464403362 - - -
13 Hb_000028_300 0.2464403362 - - hypothetical protein 0_13835_01, partial [Pinus radiata]
14 Hb_000031_310 0.2464403362 transcription factor TF Family: Orphans hypothetical protein [Trichormus azollae]
15 Hb_000037_100 0.2464403362 - - nucleic acid binding protein, putative [Ricinus communis]
16 Hb_000045_030 0.2464403362 - - -
17 Hb_000048_130 0.2464403362 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
18 Hb_000056_050 0.2464403362 - - PREDICTED: uncharacterized protein LOC104117826 [Nicotiana tomentosiformis]
19 Hb_000070_150 0.2464403362 - - hypothetical protein POPTR_0004s19980g [Populus trichocarpa]
20 Hb_000077_340 0.2464403362 - - -

Gene co-expression network

sample Hb_094730_010 Hb_094730_010 Hb_004241_220 Hb_004241_220 Hb_094730_010--Hb_004241_220 Hb_000375_270 Hb_000375_270 Hb_094730_010--Hb_000375_270 Hb_003549_060 Hb_003549_060 Hb_094730_010--Hb_003549_060 Hb_000680_040 Hb_000680_040 Hb_094730_010--Hb_000680_040 Hb_109358_010 Hb_109358_010 Hb_094730_010--Hb_109358_010 Hb_148146_030 Hb_148146_030 Hb_094730_010--Hb_148146_030 Hb_004241_220--Hb_000680_040 Hb_004241_220--Hb_000375_270 Hb_004241_220--Hb_109358_010 Hb_004241_220--Hb_003549_060 Hb_001433_060 Hb_001433_060 Hb_004241_220--Hb_001433_060 Hb_000006_020 Hb_000006_020 Hb_000375_270--Hb_000006_020 Hb_000015_240 Hb_000015_240 Hb_000375_270--Hb_000015_240 Hb_000016_090 Hb_000016_090 Hb_000375_270--Hb_000016_090 Hb_000016_240 Hb_000016_240 Hb_000375_270--Hb_000016_240 Hb_000028_020 Hb_000028_020 Hb_000375_270--Hb_000028_020 Hb_003549_060--Hb_000375_270 Hb_003398_110 Hb_003398_110 Hb_003549_060--Hb_003398_110 Hb_000129_060 Hb_000129_060 Hb_003549_060--Hb_000129_060 Hb_004019_130 Hb_004019_130 Hb_003549_060--Hb_004019_130 Hb_162008_030 Hb_162008_030 Hb_003549_060--Hb_162008_030 Hb_001546_100 Hb_001546_100 Hb_003549_060--Hb_001546_100 Hb_000680_040--Hb_001433_060 Hb_001184_120 Hb_001184_120 Hb_000680_040--Hb_001184_120 Hb_000680_040--Hb_109358_010 Hb_000200_260 Hb_000200_260 Hb_000680_040--Hb_000200_260 Hb_109358_010--Hb_001433_060 Hb_109358_010--Hb_001184_120 Hb_000866_360 Hb_000866_360 Hb_109358_010--Hb_000866_360 Hb_005015_040 Hb_005015_040 Hb_148146_030--Hb_005015_040 Hb_005348_130 Hb_005348_130 Hb_148146_030--Hb_005348_130 Hb_009554_020 Hb_009554_020 Hb_148146_030--Hb_009554_020 Hb_136620_010 Hb_136620_010 Hb_148146_030--Hb_136620_010 Hb_007970_030 Hb_007970_030 Hb_148146_030--Hb_007970_030 Hb_000069_250 Hb_000069_250 Hb_148146_030--Hb_000069_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 15.6318 0 2.05692 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis