Hb_094836_010

Information

Type -
Description -
Location Contig94836: 3-839
Sequence    

Annotation

kegg
ID rcu:RCOM_0708790
description zinc ion binding protein, putative
nr
ID XP_012077124.1
description PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
swissprot
ID A0JMD2
description Lateral signaling target protein 2 homolog OS=Danio rerio GN=zfyve28 PE=2 SV=1
trembl
ID A0A067KCV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07543 PE=4 SV=1
Gene Ontology
ID GO:0046872
description sh3 domain-containing protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094836_010 0.0 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
2 Hb_002620_020 0.0650819395 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
3 Hb_001936_010 0.0769400673 - - hypothetical protein Csa_2G348280 [Cucumis sativus]
4 Hb_004078_040 0.0777554177 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
5 Hb_000614_250 0.0786695228 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
6 Hb_001377_490 0.079258077 - - PREDICTED: uncharacterized protein LOC105642821 [Jatropha curcas]
7 Hb_004837_160 0.0810619851 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Jatropha curcas]
8 Hb_006469_080 0.0854787819 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000477_060 0.0869731093 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
10 Hb_005488_200 0.0876769064 - - PREDICTED: uncharacterized protein LOC105632499 isoform X1 [Jatropha curcas]
11 Hb_089032_030 0.0889902834 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
12 Hb_003697_040 0.0895983581 - - hypothetical protein B456_005G209600 [Gossypium raimondii]
13 Hb_000345_310 0.0906515987 - - PREDICTED: sucrose nonfermenting 4-like protein isoform X3 [Jatropha curcas]
14 Hb_033594_080 0.0911340536 - - PREDICTED: uncharacterized protein LOC105639993 [Jatropha curcas]
15 Hb_002007_210 0.0912703821 - - PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Jatropha curcas]
16 Hb_000200_020 0.0921597707 - - PREDICTED: uncharacterized protein LOC105636907 [Jatropha curcas]
17 Hb_000856_010 0.0924347779 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
18 Hb_010812_120 0.0925237314 - - hypothetical protein JCGZ_03293 [Jatropha curcas]
19 Hb_000116_260 0.0925355907 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
20 Hb_001225_080 0.0926024016 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Populus euphratica]

Gene co-expression network

sample Hb_094836_010 Hb_094836_010 Hb_002620_020 Hb_002620_020 Hb_094836_010--Hb_002620_020 Hb_001936_010 Hb_001936_010 Hb_094836_010--Hb_001936_010 Hb_004078_040 Hb_004078_040 Hb_094836_010--Hb_004078_040 Hb_000614_250 Hb_000614_250 Hb_094836_010--Hb_000614_250 Hb_001377_490 Hb_001377_490 Hb_094836_010--Hb_001377_490 Hb_004837_160 Hb_004837_160 Hb_094836_010--Hb_004837_160 Hb_000066_080 Hb_000066_080 Hb_002620_020--Hb_000066_080 Hb_000003_250 Hb_000003_250 Hb_002620_020--Hb_000003_250 Hb_002450_020 Hb_002450_020 Hb_002620_020--Hb_002450_020 Hb_002620_020--Hb_001377_490 Hb_002620_020--Hb_000614_250 Hb_001159_130 Hb_001159_130 Hb_001936_010--Hb_001159_130 Hb_092337_010 Hb_092337_010 Hb_001936_010--Hb_092337_010 Hb_000116_270 Hb_000116_270 Hb_001936_010--Hb_000116_270 Hb_001799_210 Hb_001799_210 Hb_001936_010--Hb_001799_210 Hb_001936_010--Hb_002620_020 Hb_000359_060 Hb_000359_060 Hb_004078_040--Hb_000359_060 Hb_000393_020 Hb_000393_020 Hb_004078_040--Hb_000393_020 Hb_000173_410 Hb_000173_410 Hb_004078_040--Hb_000173_410 Hb_004109_220 Hb_004109_220 Hb_004078_040--Hb_004109_220 Hb_000454_090 Hb_000454_090 Hb_004078_040--Hb_000454_090 Hb_000928_070 Hb_000928_070 Hb_004078_040--Hb_000928_070 Hb_000840_250 Hb_000840_250 Hb_000614_250--Hb_000840_250 Hb_001633_210 Hb_001633_210 Hb_000614_250--Hb_001633_210 Hb_001014_030 Hb_001014_030 Hb_000614_250--Hb_001014_030 Hb_000614_250--Hb_002450_020 Hb_000710_060 Hb_000710_060 Hb_000614_250--Hb_000710_060 Hb_003847_030 Hb_003847_030 Hb_000614_250--Hb_003847_030 Hb_000185_040 Hb_000185_040 Hb_001377_490--Hb_000185_040 Hb_000009_560 Hb_000009_560 Hb_001377_490--Hb_000009_560 Hb_000260_010 Hb_000260_010 Hb_001377_490--Hb_000260_010 Hb_000003_590 Hb_000003_590 Hb_001377_490--Hb_000003_590 Hb_164010_030 Hb_164010_030 Hb_001377_490--Hb_164010_030 Hb_001377_490--Hb_000003_250 Hb_003349_090 Hb_003349_090 Hb_004837_160--Hb_003349_090 Hb_028515_010 Hb_028515_010 Hb_004837_160--Hb_028515_010 Hb_000373_130 Hb_000373_130 Hb_004837_160--Hb_000373_130 Hb_002007_210 Hb_002007_210 Hb_004837_160--Hb_002007_210 Hb_003697_040 Hb_003697_040 Hb_004837_160--Hb_003697_040 Hb_001222_080 Hb_001222_080 Hb_004837_160--Hb_001222_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.09345 6.94653 5.62931 14.408 6.07614 9.90849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.66481 14.1998 15.0739 7.92123 7.86286

CAGE analysis