Hb_094890_010

Information

Type -
Description -
Location Contig94890: 374-922
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094890_010 0.0 - - -
2 Hb_003055_150 0.1615485002 - - serine carboxypeptidase, putative [Ricinus communis]
3 Hb_001141_290 0.2424508732 - - -
4 Hb_000500_120 0.3076122127 - - PREDICTED: uncharacterized protein LOC105648659 [Jatropha curcas]
5 Hb_014720_090 0.3121930827 - - -
6 Hb_080749_010 0.3222246463 - - PREDICTED: putative DNA-binding protein ESCAROLA [Populus euphratica]
7 Hb_011081_040 0.3254545935 - - hypothetical protein JCGZ_20956 [Jatropha curcas]
8 Hb_003020_170 0.3362365554 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
9 Hb_011249_040 0.3522216785 - - PREDICTED: acetylajmalan esterase-like [Populus euphratica]
10 Hb_001080_010 0.367145743 - - -
11 Hb_001477_150 0.3746671039 - - o-methyltransferase, putative [Ricinus communis]
12 Hb_000922_090 0.3803184183 - - PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Populus euphratica]
13 Hb_163268_010 0.3834110106 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
14 Hb_001741_130 0.3834166255 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
15 Hb_000756_020 0.3837006252 - - BnaA05g19440D [Brassica napus]
16 Hb_008505_020 0.384469208 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
17 Hb_033835_020 0.3845505763 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_005531_010 0.3851837207 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
19 Hb_008790_050 0.3870456543 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001587_210 0.387248991 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Jatropha curcas]

Gene co-expression network

sample Hb_094890_010 Hb_094890_010 Hb_003055_150 Hb_003055_150 Hb_094890_010--Hb_003055_150 Hb_001141_290 Hb_001141_290 Hb_094890_010--Hb_001141_290 Hb_000500_120 Hb_000500_120 Hb_094890_010--Hb_000500_120 Hb_014720_090 Hb_014720_090 Hb_094890_010--Hb_014720_090 Hb_080749_010 Hb_080749_010 Hb_094890_010--Hb_080749_010 Hb_011081_040 Hb_011081_040 Hb_094890_010--Hb_011081_040 Hb_003055_150--Hb_014720_090 Hb_003055_150--Hb_080749_010 Hb_003055_150--Hb_001141_290 Hb_011249_040 Hb_011249_040 Hb_003055_150--Hb_011249_040 Hb_003020_170 Hb_003020_170 Hb_003055_150--Hb_003020_170 Hb_001141_290--Hb_014720_090 Hb_000866_250 Hb_000866_250 Hb_001141_290--Hb_000866_250 Hb_001141_290--Hb_011081_040 Hb_001080_010 Hb_001080_010 Hb_001141_290--Hb_001080_010 Hb_000500_120--Hb_001141_290 Hb_000500_120--Hb_001080_010 Hb_000563_260 Hb_000563_260 Hb_000500_120--Hb_000563_260 Hb_000042_100 Hb_000042_100 Hb_000500_120--Hb_000042_100 Hb_000249_120 Hb_000249_120 Hb_000500_120--Hb_000249_120 Hb_007672_030 Hb_007672_030 Hb_014720_090--Hb_007672_030 Hb_163206_010 Hb_163206_010 Hb_014720_090--Hb_163206_010 Hb_014720_090--Hb_000866_250 Hb_080749_010--Hb_003020_170 Hb_080749_010--Hb_011249_040 Hb_001477_150 Hb_001477_150 Hb_080749_010--Hb_001477_150 Hb_012338_020 Hb_012338_020 Hb_080749_010--Hb_012338_020 Hb_000321_130 Hb_000321_130 Hb_080749_010--Hb_000321_130 Hb_011540_030 Hb_011540_030 Hb_011081_040--Hb_011540_030 Hb_134708_010 Hb_134708_010 Hb_011081_040--Hb_134708_010 Hb_000427_070 Hb_000427_070 Hb_011081_040--Hb_000427_070 Hb_067793_010 Hb_067793_010 Hb_011081_040--Hb_067793_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.139112 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.147983 0.238976 0 0

CAGE analysis