Hb_094900_010

Information

Type -
Description -
Location Contig94900: 9263-11580
Sequence    

Annotation

kegg
ID rcu:RCOM_1577280
description ankyrin repeat-containing protein, putative
nr
ID XP_002513462.1
description ankyrin repeat-containing protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RI93
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1577280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63383: 10879-11029
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094900_010 0.0 - - ankyrin repeat-containing protein, putative [Ricinus communis]
2 Hb_000679_220 0.1826989418 - - PREDICTED: uncharacterized protein LOC105637638 [Jatropha curcas]
3 Hb_119504_010 0.2426323801 - - hypothetical protein JCGZ_15304 [Jatropha curcas]
4 Hb_159036_010 0.2500142608 - - -
5 Hb_003523_040 0.2508107114 - - F15O4.13 [Arabidopsis thaliana]
6 Hb_122556_010 0.260947548 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
7 Hb_005344_030 0.2623029859 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
8 Hb_026239_010 0.2759274813 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
9 Hb_001229_020 0.2822286504 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
10 Hb_010977_010 0.2847059826 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_002918_050 0.2889368798 transcription factor TF Family: SBP PREDICTED: mitochondrial arginine transporter BAC1-like isoform X1 [Jatropha curcas]
12 Hb_001059_170 0.2889407632 - - hexose transporter 1 [Hevea brasiliensis]
13 Hb_000154_010 0.2998861764 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_133820_010 0.2999339444 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
15 Hb_000690_120 0.3011291462 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
16 Hb_000052_020 0.3044999538 desease resistance Gene Name: ABC_tran PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 2-like [Jatropha curcas]
17 Hb_000460_070 0.3066248064 - - luminal binding protein [Gossypium hirsutum]
18 Hb_020334_010 0.3090222429 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_001433_130 0.3094769624 - - PREDICTED: uncharacterized protein LOC105647468 isoform X1 [Jatropha curcas]
20 Hb_001160_130 0.3095522699 - - Glycolipid transfer protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_094900_010 Hb_094900_010 Hb_000679_220 Hb_000679_220 Hb_094900_010--Hb_000679_220 Hb_119504_010 Hb_119504_010 Hb_094900_010--Hb_119504_010 Hb_159036_010 Hb_159036_010 Hb_094900_010--Hb_159036_010 Hb_003523_040 Hb_003523_040 Hb_094900_010--Hb_003523_040 Hb_122556_010 Hb_122556_010 Hb_094900_010--Hb_122556_010 Hb_005344_030 Hb_005344_030 Hb_094900_010--Hb_005344_030 Hb_001059_170 Hb_001059_170 Hb_000679_220--Hb_001059_170 Hb_000389_050 Hb_000389_050 Hb_000679_220--Hb_000389_050 Hb_002936_080 Hb_002936_080 Hb_000679_220--Hb_002936_080 Hb_000679_220--Hb_005344_030 Hb_004672_030 Hb_004672_030 Hb_000679_220--Hb_004672_030 Hb_001780_120 Hb_001780_120 Hb_119504_010--Hb_001780_120 Hb_007181_020 Hb_007181_020 Hb_119504_010--Hb_007181_020 Hb_009005_050 Hb_009005_050 Hb_119504_010--Hb_009005_050 Hb_000915_030 Hb_000915_030 Hb_119504_010--Hb_000915_030 Hb_119504_010--Hb_000679_220 Hb_159036_010--Hb_122556_010 Hb_016482_010 Hb_016482_010 Hb_159036_010--Hb_016482_010 Hb_133820_010 Hb_133820_010 Hb_159036_010--Hb_133820_010 Hb_159036_010--Hb_003523_040 Hb_012572_020 Hb_012572_020 Hb_159036_010--Hb_012572_020 Hb_003523_040--Hb_122556_010 Hb_043708_010 Hb_043708_010 Hb_003523_040--Hb_043708_010 Hb_003523_040--Hb_133820_010 Hb_123046_010 Hb_123046_010 Hb_003523_040--Hb_123046_010 Hb_122556_010--Hb_133820_010 Hb_011484_010 Hb_011484_010 Hb_122556_010--Hb_011484_010 Hb_006132_030 Hb_006132_030 Hb_122556_010--Hb_006132_030 Hb_005344_030--Hb_006132_030 Hb_002918_050 Hb_002918_050 Hb_005344_030--Hb_002918_050 Hb_000052_020 Hb_000052_020 Hb_005344_030--Hb_000052_020 Hb_000429_090 Hb_000429_090 Hb_005344_030--Hb_000429_090 Hb_000622_240 Hb_000622_240 Hb_005344_030--Hb_000622_240 Hb_091194_010 Hb_091194_010 Hb_005344_030--Hb_091194_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.43337 0.102491 0.0761434 0.919687 0 0.103141
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.07156 0.953334 5.59985 0.601073 5.86496

CAGE analysis