Hb_094917_010

Information

Type -
Description -
Location Contig94917: 6409-11414
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094917_010 0.0 - - -
2 Hb_001570_010 0.061947201 - - -
3 Hb_003406_020 0.1674245275 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
4 Hb_002447_100 0.1681486739 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
5 Hb_155423_010 0.1921091045 - - -
6 Hb_007590_030 0.1925821158 - - PREDICTED: iridoid synthase [Jatropha curcas]
7 Hb_151870_010 0.2115743714 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
8 Hb_006807_010 0.2116397433 - - hypothetical protein JCGZ_20881 [Jatropha curcas]
9 Hb_002631_270 0.2141938541 transcription factor TF Family: MYB hypothetical protein POPTR_0005s09930g [Populus trichocarpa]
10 Hb_020250_020 0.2239673086 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
11 Hb_112791_030 0.2243780477 - - Uncharacterized protein TCM_027940 [Theobroma cacao]
12 Hb_000644_020 0.2268635329 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
13 Hb_145080_010 0.2270838746 - - PREDICTED: uncharacterized protein LOC105643750 [Jatropha curcas]
14 Hb_004274_010 0.2271141389 - - PREDICTED: uncharacterized protein LOC104451199 [Eucalyptus grandis]
15 Hb_000567_270 0.2277035329 - - hypothetical protein L484_017162 [Morus notabilis]
16 Hb_009851_090 0.2285664553 - - Protein ABIL2, putative [Ricinus communis]
17 Hb_011476_010 0.2291659846 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
18 Hb_001452_150 0.2300408277 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
19 Hb_004530_010 0.2307572098 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
20 Hb_000432_070 0.2308191562 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]

Gene co-expression network

sample Hb_094917_010 Hb_094917_010 Hb_001570_010 Hb_001570_010 Hb_094917_010--Hb_001570_010 Hb_003406_020 Hb_003406_020 Hb_094917_010--Hb_003406_020 Hb_002447_100 Hb_002447_100 Hb_094917_010--Hb_002447_100 Hb_155423_010 Hb_155423_010 Hb_094917_010--Hb_155423_010 Hb_007590_030 Hb_007590_030 Hb_094917_010--Hb_007590_030 Hb_151870_010 Hb_151870_010 Hb_094917_010--Hb_151870_010 Hb_001570_010--Hb_003406_020 Hb_001570_010--Hb_002447_100 Hb_001570_010--Hb_155423_010 Hb_000567_270 Hb_000567_270 Hb_001570_010--Hb_000567_270 Hb_034197_020 Hb_034197_020 Hb_001570_010--Hb_034197_020 Hb_020250_020 Hb_020250_020 Hb_003406_020--Hb_020250_020 Hb_004274_010 Hb_004274_010 Hb_003406_020--Hb_004274_010 Hb_001452_150 Hb_001452_150 Hb_003406_020--Hb_001452_150 Hb_003427_040 Hb_003427_040 Hb_003406_020--Hb_003427_040 Hb_002447_100--Hb_155423_010 Hb_002447_100--Hb_007590_030 Hb_112791_030 Hb_112791_030 Hb_002447_100--Hb_112791_030 Hb_001542_010 Hb_001542_010 Hb_002447_100--Hb_001542_010 Hb_145080_010 Hb_145080_010 Hb_002447_100--Hb_145080_010 Hb_011358_010 Hb_011358_010 Hb_002447_100--Hb_011358_010 Hb_002631_270 Hb_002631_270 Hb_155423_010--Hb_002631_270 Hb_003994_070 Hb_003994_070 Hb_155423_010--Hb_003994_070 Hb_009851_090 Hb_009851_090 Hb_155423_010--Hb_009851_090 Hb_155423_010--Hb_151870_010 Hb_155423_010--Hb_000567_270 Hb_000193_090 Hb_000193_090 Hb_007590_030--Hb_000193_090 Hb_001221_250 Hb_001221_250 Hb_007590_030--Hb_001221_250 Hb_125181_010 Hb_125181_010 Hb_007590_030--Hb_125181_010 Hb_004530_010 Hb_004530_010 Hb_007590_030--Hb_004530_010 Hb_007590_030--Hb_112791_030 Hb_151870_010--Hb_002631_270 Hb_006807_010 Hb_006807_010 Hb_151870_010--Hb_006807_010 Hb_017225_030 Hb_017225_030 Hb_151870_010--Hb_017225_030 Hb_151870_010--Hb_009851_090 Hb_102761_010 Hb_102761_010 Hb_151870_010--Hb_102761_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0206657 0 0.0681118 0.0212682 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0647769 0.256765

CAGE analysis