Hb_094938_010

Information

Type -
Description -
Location Contig94938: 1610-2807
Sequence    

Annotation

kegg
ID rcu:RCOM_0737410
description hypothetical protein
nr
ID -
description -
swissprot
ID -
description -
trembl
ID B9SNJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0737410 PE=4 SV=1
Gene Ontology
ID GO:0005515
description ---NA---

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094938_010 0.0 - - -
2 Hb_012787_020 0.1626957208 - - PREDICTED: thioredoxin H7-like [Jatropha curcas]
3 Hb_000339_060 0.1662726793 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
4 Hb_002085_060 0.1665413942 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003638_020 0.1683632182 - - PREDICTED: uncharacterized protein LOC105645807 [Jatropha curcas]
6 Hb_070771_010 0.1690558527 - - PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
7 Hb_001935_200 0.1702135883 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
8 Hb_000645_230 0.1708156219 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
9 Hb_071079_040 0.1712102572 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
10 Hb_000684_190 0.1717916244 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
11 Hb_003645_040 0.1726843778 transcription factor TF Family: MYB hypothetical protein POPTR_0003s13190g [Populus trichocarpa]
12 Hb_001722_110 0.1769158075 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
13 Hb_000853_140 0.1782888082 - - hypothetical protein POPTR_0014s12080g [Populus trichocarpa]
14 Hb_031330_010 0.1796045663 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
15 Hb_004158_040 0.1797323042 - - PREDICTED: WAT1-related protein At2g37460-like [Jatropha curcas]
16 Hb_029665_010 0.1819051458 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_009117_020 0.1822111764 - - RALF-LIKE 32 family protein [Populus trichocarpa]
18 Hb_000580_210 0.1822509166 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
19 Hb_000847_110 0.1833835496 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002785_020 0.1838374795 - - PREDICTED: laccase-4-like [Jatropha curcas]

Gene co-expression network

sample Hb_094938_010 Hb_094938_010 Hb_012787_020 Hb_012787_020 Hb_094938_010--Hb_012787_020 Hb_000339_060 Hb_000339_060 Hb_094938_010--Hb_000339_060 Hb_002085_060 Hb_002085_060 Hb_094938_010--Hb_002085_060 Hb_003638_020 Hb_003638_020 Hb_094938_010--Hb_003638_020 Hb_070771_010 Hb_070771_010 Hb_094938_010--Hb_070771_010 Hb_001935_200 Hb_001935_200 Hb_094938_010--Hb_001935_200 Hb_005588_050 Hb_005588_050 Hb_012787_020--Hb_005588_050 Hb_071079_040 Hb_071079_040 Hb_012787_020--Hb_071079_040 Hb_000645_080 Hb_000645_080 Hb_012787_020--Hb_000645_080 Hb_028514_010 Hb_028514_010 Hb_012787_020--Hb_028514_010 Hb_001541_170 Hb_001541_170 Hb_012787_020--Hb_001541_170 Hb_115572_010 Hb_115572_010 Hb_012787_020--Hb_115572_010 Hb_000339_060--Hb_003638_020 Hb_000339_060--Hb_002085_060 Hb_000339_060--Hb_070771_010 Hb_002499_030 Hb_002499_030 Hb_000339_060--Hb_002499_030 Hb_000339_060--Hb_071079_040 Hb_000684_190 Hb_000684_190 Hb_000339_060--Hb_000684_190 Hb_002085_060--Hb_003638_020 Hb_002085_060--Hb_070771_010 Hb_003645_040 Hb_003645_040 Hb_002085_060--Hb_003645_040 Hb_064047_020 Hb_064047_020 Hb_002085_060--Hb_064047_020 Hb_002085_060--Hb_002499_030 Hb_003638_020--Hb_070771_010 Hb_003638_020--Hb_002499_030 Hb_001722_110 Hb_001722_110 Hb_003638_020--Hb_001722_110 Hb_005614_020 Hb_005614_020 Hb_003638_020--Hb_005614_020 Hb_001307_180 Hb_001307_180 Hb_070771_010--Hb_001307_180 Hb_011912_010 Hb_011912_010 Hb_070771_010--Hb_011912_010 Hb_070771_010--Hb_003645_040 Hb_001935_200--Hb_000684_190 Hb_003788_030 Hb_003788_030 Hb_001935_200--Hb_003788_030 Hb_002785_020 Hb_002785_020 Hb_001935_200--Hb_002785_020 Hb_000645_230 Hb_000645_230 Hb_001935_200--Hb_000645_230 Hb_000422_090 Hb_000422_090 Hb_001935_200--Hb_000422_090 Hb_155215_030 Hb_155215_030 Hb_001935_200--Hb_155215_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.411431 0.165719 4.92403 0 0.337802
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.48215

CAGE analysis