Hb_094970_010

Information

Type -
Description -
Location Contig94970: 5166-10229
Sequence    

Annotation

kegg
ID pop:POPTR_0015s09690g
description POPTRDRAFT_776169; quinolinate synthetase A-related family protein
nr
ID XP_012079962.1
description PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
swissprot
ID Q9FGS4
description Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana GN=QS PE=1 SV=1
trembl
ID A0A067KFH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11391 PE=4 SV=1
Gene Ontology
ID GO:0008047
description quinolinate chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63386: 5285-10125
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094970_010 0.0 - - PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
2 Hb_001910_010 0.0708641715 - - Dual specificity protein phosphatase, putative [Ricinus communis]
3 Hb_006059_030 0.0889802992 - - glutamate dehydrogenase, putative [Ricinus communis]
4 Hb_000120_080 0.1035935842 - - PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Jatropha curcas]
5 Hb_000139_340 0.1054939724 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003207_010 0.1058633288 - - PREDICTED: phospholipase D beta 1-like [Jatropha curcas]
7 Hb_001493_150 0.1075217619 - - PREDICTED: alanine aminotransferase 2-like [Jatropha curcas]
8 Hb_001728_140 0.1085128764 - - -
9 Hb_000251_030 0.1094441099 - - nicotinate phosphoribosyltransferase, putative [Ricinus communis]
10 Hb_000309_050 0.1104913546 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
11 Hb_000086_630 0.1129516117 - - PREDICTED: dicarboxylate transporter 2.1, chloroplastic [Jatropha curcas]
12 Hb_002900_110 0.1138557235 - - amino acid transporter, putative [Ricinus communis]
13 Hb_073171_100 0.1139692167 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
14 Hb_003531_070 0.1154439136 - - PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
15 Hb_011224_160 0.1157051096 transcription factor, rubber biosynthesis TF Family: HSF, Gene Name: Farnesyl diphosphate synthase PREDICTED: heat stress transcription factor A-5 [Jatropha curcas]
16 Hb_001975_150 0.1159703252 - - PREDICTED: RINT1-like protein MAG2L [Jatropha curcas]
17 Hb_009615_060 0.1163194513 - - PREDICTED: prolyl endopeptidase-like [Jatropha curcas]
18 Hb_158530_020 0.1179476634 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
19 Hb_000352_310 0.1184917927 - - hypothetical protein CISIN_1g0017891mg, partial [Citrus sinensis]
20 Hb_000035_390 0.1190444795 - - hypothetical protein CISIN_1g003355mg [Citrus sinensis]

Gene co-expression network

sample Hb_094970_010 Hb_094970_010 Hb_001910_010 Hb_001910_010 Hb_094970_010--Hb_001910_010 Hb_006059_030 Hb_006059_030 Hb_094970_010--Hb_006059_030 Hb_000120_080 Hb_000120_080 Hb_094970_010--Hb_000120_080 Hb_000139_340 Hb_000139_340 Hb_094970_010--Hb_000139_340 Hb_003207_010 Hb_003207_010 Hb_094970_010--Hb_003207_010 Hb_001493_150 Hb_001493_150 Hb_094970_010--Hb_001493_150 Hb_001910_010--Hb_006059_030 Hb_005976_080 Hb_005976_080 Hb_001910_010--Hb_005976_080 Hb_003376_250 Hb_003376_250 Hb_001910_010--Hb_003376_250 Hb_000327_180 Hb_000327_180 Hb_001910_010--Hb_000327_180 Hb_000309_050 Hb_000309_050 Hb_001910_010--Hb_000309_050 Hb_012393_030 Hb_012393_030 Hb_006059_030--Hb_012393_030 Hb_000364_050 Hb_000364_050 Hb_006059_030--Hb_000364_050 Hb_012733_040 Hb_012733_040 Hb_006059_030--Hb_012733_040 Hb_006059_030--Hb_005976_080 Hb_000107_270 Hb_000107_270 Hb_006059_030--Hb_000107_270 Hb_001195_400 Hb_001195_400 Hb_006059_030--Hb_001195_400 Hb_000580_120 Hb_000580_120 Hb_000120_080--Hb_000580_120 Hb_000029_140 Hb_000029_140 Hb_000120_080--Hb_000029_140 Hb_000352_310 Hb_000352_310 Hb_000120_080--Hb_000352_310 Hb_000189_550 Hb_000189_550 Hb_000120_080--Hb_000189_550 Hb_010863_010 Hb_010863_010 Hb_000120_080--Hb_010863_010 Hb_000011_060 Hb_000011_060 Hb_000120_080--Hb_000011_060 Hb_002900_110 Hb_002900_110 Hb_000139_340--Hb_002900_110 Hb_180378_010 Hb_180378_010 Hb_000139_340--Hb_180378_010 Hb_005015_110 Hb_005015_110 Hb_000139_340--Hb_005015_110 Hb_001571_060 Hb_001571_060 Hb_000139_340--Hb_001571_060 Hb_005218_080 Hb_005218_080 Hb_000139_340--Hb_005218_080 Hb_001731_030 Hb_001731_030 Hb_003207_010--Hb_001731_030 Hb_003207_010--Hb_005015_110 Hb_000808_170 Hb_000808_170 Hb_003207_010--Hb_000808_170 Hb_003207_010--Hb_001493_150 Hb_003207_010--Hb_000139_340 Hb_009615_060 Hb_009615_060 Hb_001493_150--Hb_009615_060 Hb_002301_100 Hb_002301_100 Hb_001493_150--Hb_002301_100 Hb_001493_150--Hb_012393_030 Hb_001221_020 Hb_001221_020 Hb_001493_150--Hb_001221_020 Hb_005648_010 Hb_005648_010 Hb_001493_150--Hb_005648_010 Hb_021576_010 Hb_021576_010 Hb_001493_150--Hb_021576_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.57889 8.43865 10.01 10.2978 5.1681 3.95943
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.7253 11.6311 11.6304 20.6092 20.8184

CAGE analysis