Hb_095413_040

Information

Type -
Description -
Location Contig95413: 31942-32777
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_095413_040 0.0 - - -
2 Hb_017836_010 0.07000102 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
3 Hb_049438_010 0.0763021298 - - -
4 Hb_000926_220 0.081248346 - - -
5 Hb_002498_200 0.1578102521 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
6 Hb_003607_030 0.1762538927 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor ABI3 [Jatropha curcas]
7 Hb_009693_040 0.1866697399 - - PREDICTED: serine/threonine-protein kinase At3g07070 [Brassica rapa]
8 Hb_007963_050 0.1932358693 - - -
9 Hb_004466_010 0.2425381722 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
10 Hb_000953_150 0.257071657 - - -
11 Hb_000098_280 0.2635153925 - - PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Jatropha curcas]
12 Hb_000011_030 0.2694485732 - - hypothetical protein POPTR_0003s18920g [Populus trichocarpa]
13 Hb_000015_110 0.2694485732 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
14 Hb_000029_040 0.2694485732 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000030_110 0.2694485732 - - -
16 Hb_000034_130 0.2694485732 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
17 Hb_000046_470 0.2694485732 - - glutaredoxin, grx, putative [Ricinus communis]
18 Hb_000058_010 0.2694485732 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_000060_140 0.2694485732 - - -
20 Hb_000070_020 0.2694485732 - - -

Gene co-expression network

sample Hb_095413_040 Hb_095413_040 Hb_017836_010 Hb_017836_010 Hb_095413_040--Hb_017836_010 Hb_049438_010 Hb_049438_010 Hb_095413_040--Hb_049438_010 Hb_000926_220 Hb_000926_220 Hb_095413_040--Hb_000926_220 Hb_002498_200 Hb_002498_200 Hb_095413_040--Hb_002498_200 Hb_003607_030 Hb_003607_030 Hb_095413_040--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_095413_040--Hb_009693_040 Hb_017836_010--Hb_000926_220 Hb_017836_010--Hb_003607_030 Hb_017836_010--Hb_009693_040 Hb_007963_050 Hb_007963_050 Hb_017836_010--Hb_007963_050 Hb_017836_010--Hb_049438_010 Hb_049438_010--Hb_002498_200 Hb_049438_010--Hb_000926_220 Hb_000011_030 Hb_000011_030 Hb_049438_010--Hb_000011_030 Hb_000015_110 Hb_000015_110 Hb_049438_010--Hb_000015_110 Hb_000926_220--Hb_003607_030 Hb_000926_220--Hb_009693_040 Hb_000926_220--Hb_007963_050 Hb_122567_010 Hb_122567_010 Hb_002498_200--Hb_122567_010 Hb_002498_200--Hb_017836_010 Hb_002498_200--Hb_000926_220 Hb_011909_090 Hb_011909_090 Hb_002498_200--Hb_011909_090 Hb_003607_030--Hb_009693_040 Hb_003607_030--Hb_007963_050 Hb_000953_150 Hb_000953_150 Hb_003607_030--Hb_000953_150 Hb_000098_280 Hb_000098_280 Hb_003607_030--Hb_000098_280 Hb_080765_020 Hb_080765_020 Hb_003607_030--Hb_080765_020 Hb_009693_040--Hb_007963_050 Hb_009693_040--Hb_000953_150 Hb_009693_040--Hb_000098_280 Hb_009693_040--Hb_080765_020 Hb_046727_010 Hb_046727_010 Hb_009693_040--Hb_046727_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.8271 0 0 0 0.451984 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis