Hb_095471_010

Information

Type -
Description -
Location Contig95471: 2993-4124
Sequence    

Annotation

kegg
ID rcu:RCOM_0688710
description amino acid transporter, putative
nr
ID XP_012091202.1
description PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JD10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03363 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sodium-coupled neutral amino acid transporter 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_095471_010 0.0 - - PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Jatropha curcas]
2 Hb_000313_320 0.1811736525 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
3 Hb_129067_010 0.1904839337 - - Cytochrome P450 superfamily protein [Theobroma cacao]
4 Hb_000365_260 0.1909947746 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000465_120 0.1941455566 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
6 Hb_000815_100 0.2006389059 - - -
7 Hb_032264_130 0.2019846586 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
8 Hb_000849_150 0.2073537776 - - hypothetical protein JCGZ_15099 [Jatropha curcas]
9 Hb_012384_050 0.207561874 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
10 Hb_088542_010 0.2119207847 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
11 Hb_001632_010 0.2188089113 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
12 Hb_008707_030 0.2209217533 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
13 Hb_001946_280 0.2238427755 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000544_040 0.2253492058 - - PREDICTED: mitogen-activated protein kinase 9-like [Jatropha curcas]
15 Hb_002450_110 0.2260079387 - - PREDICTED: geraniol 8-hydroxylase-like [Beta vulgaris subsp. vulgaris]
16 Hb_019936_010 0.2263085561 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
17 Hb_002893_020 0.2264895788 - - hypothetical protein JCGZ_21319 [Jatropha curcas]
18 Hb_073212_010 0.2269890311 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
19 Hb_007765_060 0.2275693714 - - Proliferating cell nuclear antigen [Theobroma cacao]
20 Hb_031862_170 0.2280150548 - - immunophilin, putative [Ricinus communis]

Gene co-expression network

sample Hb_095471_010 Hb_095471_010 Hb_000313_320 Hb_000313_320 Hb_095471_010--Hb_000313_320 Hb_129067_010 Hb_129067_010 Hb_095471_010--Hb_129067_010 Hb_000365_260 Hb_000365_260 Hb_095471_010--Hb_000365_260 Hb_000465_120 Hb_000465_120 Hb_095471_010--Hb_000465_120 Hb_000815_100 Hb_000815_100 Hb_095471_010--Hb_000815_100 Hb_032264_130 Hb_032264_130 Hb_095471_010--Hb_032264_130 Hb_000186_100 Hb_000186_100 Hb_000313_320--Hb_000186_100 Hb_000101_180 Hb_000101_180 Hb_000313_320--Hb_000101_180 Hb_000258_150 Hb_000258_150 Hb_000313_320--Hb_000258_150 Hb_123104_010 Hb_123104_010 Hb_000313_320--Hb_123104_010 Hb_002388_060 Hb_002388_060 Hb_000313_320--Hb_002388_060 Hb_088542_010 Hb_088542_010 Hb_129067_010--Hb_088542_010 Hb_001632_010 Hb_001632_010 Hb_129067_010--Hb_001632_010 Hb_000733_040 Hb_000733_040 Hb_129067_010--Hb_000733_040 Hb_073212_010 Hb_073212_010 Hb_129067_010--Hb_073212_010 Hb_012384_050 Hb_012384_050 Hb_129067_010--Hb_012384_050 Hb_162286_020 Hb_162286_020 Hb_000365_260--Hb_162286_020 Hb_000179_200 Hb_000179_200 Hb_000365_260--Hb_000179_200 Hb_001268_210 Hb_001268_210 Hb_000365_260--Hb_001268_210 Hb_001916_120 Hb_001916_120 Hb_000365_260--Hb_001916_120 Hb_002027_220 Hb_002027_220 Hb_000365_260--Hb_002027_220 Hb_000365_260--Hb_000465_120 Hb_005322_030 Hb_005322_030 Hb_000465_120--Hb_005322_030 Hb_001498_030 Hb_001498_030 Hb_000465_120--Hb_001498_030 Hb_000849_150 Hb_000849_150 Hb_000465_120--Hb_000849_150 Hb_004531_090 Hb_004531_090 Hb_000465_120--Hb_004531_090 Hb_001408_090 Hb_001408_090 Hb_000465_120--Hb_001408_090 Hb_000742_250 Hb_000742_250 Hb_000465_120--Hb_000742_250 Hb_002192_070 Hb_002192_070 Hb_000815_100--Hb_002192_070 Hb_000815_100--Hb_000849_150 Hb_007765_060 Hb_007765_060 Hb_000815_100--Hb_007765_060 Hb_030414_050 Hb_030414_050 Hb_000815_100--Hb_030414_050 Hb_000544_040 Hb_000544_040 Hb_000815_100--Hb_000544_040 Hb_032264_130--Hb_002388_060 Hb_011616_030 Hb_011616_030 Hb_032264_130--Hb_011616_030 Hb_053262_010 Hb_053262_010 Hb_032264_130--Hb_053262_010 Hb_019936_010 Hb_019936_010 Hb_032264_130--Hb_019936_010 Hb_007545_210 Hb_007545_210 Hb_032264_130--Hb_007545_210 Hb_170116_010 Hb_170116_010 Hb_032264_130--Hb_170116_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.48193 0.327668 0.341659 0.688556 2.2967 1.63953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.154734 0.851542 1.30706 0.593133 0.362299

CAGE analysis