Hb_095471_020

Information

Type -
Description -
Location Contig95471: 4543-5811
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_095471_020 0.0 - - -
2 Hb_065755_020 0.1337968593 - - choline monooxygenase, putative [Ricinus communis]
3 Hb_001776_200 0.1403072554 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
4 Hb_004667_040 0.1468015424 - - ATP binding protein, putative [Ricinus communis]
5 Hb_078954_010 0.1573904007 - - hypothetical protein RCOM_0841800 [Ricinus communis]
6 Hb_005724_050 0.1661295204 - - -
7 Hb_001294_040 0.166596505 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
8 Hb_000692_210 0.1697787131 - - PREDICTED: 24-methylenesterol C-methyltransferase 2 [Jatropha curcas]
9 Hb_047442_010 0.1715826056 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
10 Hb_002609_190 0.1719545793 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
11 Hb_000809_140 0.1751193356 - - hypothetical protein JCGZ_12354 [Jatropha curcas]
12 Hb_003747_050 0.1831227437 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
13 Hb_032202_050 0.1849533554 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
14 Hb_000008_430 0.1865136351 - - PREDICTED: zinc finger CCCH domain-containing protein 24 isoform X1 [Jatropha curcas]
15 Hb_000111_390 0.191192964 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
16 Hb_011671_110 0.1914969551 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
17 Hb_002965_070 0.1922049217 - - PREDICTED: extensin [Jatropha curcas]
18 Hb_004837_220 0.1931993112 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
19 Hb_005000_140 0.1932611009 - - PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
20 Hb_005394_010 0.1951517668 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]

Gene co-expression network

sample Hb_095471_020 Hb_095471_020 Hb_065755_020 Hb_065755_020 Hb_095471_020--Hb_065755_020 Hb_001776_200 Hb_001776_200 Hb_095471_020--Hb_001776_200 Hb_004667_040 Hb_004667_040 Hb_095471_020--Hb_004667_040 Hb_078954_010 Hb_078954_010 Hb_095471_020--Hb_078954_010 Hb_005724_050 Hb_005724_050 Hb_095471_020--Hb_005724_050 Hb_001294_040 Hb_001294_040 Hb_095471_020--Hb_001294_040 Hb_065755_020--Hb_078954_010 Hb_046109_010 Hb_046109_010 Hb_065755_020--Hb_046109_010 Hb_065755_020--Hb_004667_040 Hb_032202_050 Hb_032202_050 Hb_065755_020--Hb_032202_050 Hb_002965_070 Hb_002965_070 Hb_065755_020--Hb_002965_070 Hb_011671_110 Hb_011671_110 Hb_001776_200--Hb_011671_110 Hb_001414_050 Hb_001414_050 Hb_001776_200--Hb_001414_050 Hb_047442_010 Hb_047442_010 Hb_001776_200--Hb_047442_010 Hb_005394_010 Hb_005394_010 Hb_001776_200--Hb_005394_010 Hb_002609_190 Hb_002609_190 Hb_001776_200--Hb_002609_190 Hb_001894_160 Hb_001894_160 Hb_001776_200--Hb_001894_160 Hb_002641_050 Hb_002641_050 Hb_004667_040--Hb_002641_050 Hb_000069_430 Hb_000069_430 Hb_004667_040--Hb_000069_430 Hb_025236_020 Hb_025236_020 Hb_004667_040--Hb_025236_020 Hb_002343_020 Hb_002343_020 Hb_004667_040--Hb_002343_020 Hb_002897_010 Hb_002897_010 Hb_078954_010--Hb_002897_010 Hb_011671_280 Hb_011671_280 Hb_078954_010--Hb_011671_280 Hb_000809_140 Hb_000809_140 Hb_078954_010--Hb_000809_140 Hb_003747_050 Hb_003747_050 Hb_078954_010--Hb_003747_050 Hb_000008_430 Hb_000008_430 Hb_005724_050--Hb_000008_430 Hb_001409_050 Hb_001409_050 Hb_005724_050--Hb_001409_050 Hb_000732_230 Hb_000732_230 Hb_005724_050--Hb_000732_230 Hb_001205_180 Hb_001205_180 Hb_005724_050--Hb_001205_180 Hb_001951_240 Hb_001951_240 Hb_005724_050--Hb_001951_240 Hb_005724_050--Hb_002609_190 Hb_001158_120 Hb_001158_120 Hb_001294_040--Hb_001158_120 Hb_011381_070 Hb_011381_070 Hb_001294_040--Hb_011381_070 Hb_014361_170 Hb_014361_170 Hb_001294_040--Hb_014361_170 Hb_000366_050 Hb_000366_050 Hb_001294_040--Hb_000366_050 Hb_001294_040--Hb_000008_430 Hb_000035_490 Hb_000035_490 Hb_001294_040--Hb_000035_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.40731 6.31301 9.17162 3.88784 1.89141 0.583339
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0842552 0.331165 0 3.56185 1.56617

CAGE analysis