Hb_095595_010

Information

Type -
Description -
Location Contig95595: 1020-2033
Sequence    

Annotation

kegg
ID pop:POPTR_0008s03980g
description POPTRDRAFT_803174; esterase/lipase/thioesterase family protein
nr
ID XP_012093251.1
description PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067L7H8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20037 PE=4 SV=1
Gene Ontology
ID GO:0005737
description caffeoylshikimate esterase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63540: 950-2346 , PASA_asmbl_63542: 950-2282
cDNA
(Sanger)
(ID:Location)		 030_K08.ab1: 2013-2207

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_095595_010 0.0 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
2 Hb_003929_110 0.1043164674 - - PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_003058_040 0.1093946819 - - rotamase, putative [Ricinus communis]
4 Hb_001500_050 0.1215349242 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
5 Hb_011344_160 0.124325649 - - PREDICTED: primary amine oxidase [Jatropha curcas]
6 Hb_011316_090 0.1255566315 - - OSJNBa0004L19.22 [Oryza sativa Japonica Group]
7 Hb_003794_010 0.1314614175 - - PREDICTED: uncharacterized protein LOC105641013 [Jatropha curcas]
8 Hb_005867_060 0.1335044678 - - PREDICTED: NADPH--cytochrome P450 reductase [Jatropha curcas]
9 Hb_005054_230 0.1335313836 - - PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Jatropha curcas]
10 Hb_002022_060 0.1378184402 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
11 Hb_005829_010 0.1386891755 - - PREDICTED: uncharacterized protein LOC105640979 [Jatropha curcas]
12 Hb_021443_040 0.140919433 - - acc synthase, putative [Ricinus communis]
13 Hb_002276_020 0.1410219104 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
14 Hb_001123_260 0.1415269958 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 3-like [Jatropha curcas]
15 Hb_001390_110 0.1432011772 - - PREDICTED: uncharacterized protein LOC105635984 [Jatropha curcas]
16 Hb_000665_160 0.1436108065 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X1 [Jatropha curcas]
17 Hb_002527_030 0.1447161111 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Jatropha curcas]
18 Hb_009467_060 0.1450843232 - - PREDICTED: chromo domain-containing protein LHP1 isoform X1 [Jatropha curcas]
19 Hb_002639_140 0.1452904614 - - PREDICTED: 4-coumarate--CoA ligase-like 5 [Jatropha curcas]
20 Hb_000009_090 0.1475414714 transcription factor TF Family: bZIP G-box-binding factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_095595_010 Hb_095595_010 Hb_003929_110 Hb_003929_110 Hb_095595_010--Hb_003929_110 Hb_003058_040 Hb_003058_040 Hb_095595_010--Hb_003058_040 Hb_001500_050 Hb_001500_050 Hb_095595_010--Hb_001500_050 Hb_011344_160 Hb_011344_160 Hb_095595_010--Hb_011344_160 Hb_011316_090 Hb_011316_090 Hb_095595_010--Hb_011316_090 Hb_003794_010 Hb_003794_010 Hb_095595_010--Hb_003794_010 Hb_021443_040 Hb_021443_040 Hb_003929_110--Hb_021443_040 Hb_001123_260 Hb_001123_260 Hb_003929_110--Hb_001123_260 Hb_002849_100 Hb_002849_100 Hb_003929_110--Hb_002849_100 Hb_000679_020 Hb_000679_020 Hb_003929_110--Hb_000679_020 Hb_000027_190 Hb_000027_190 Hb_003929_110--Hb_000027_190 Hb_000044_040 Hb_000044_040 Hb_003929_110--Hb_000044_040 Hb_002728_070 Hb_002728_070 Hb_003058_040--Hb_002728_070 Hb_001936_060 Hb_001936_060 Hb_003058_040--Hb_001936_060 Hb_000627_030 Hb_000627_030 Hb_003058_040--Hb_000627_030 Hb_000329_140 Hb_000329_140 Hb_003058_040--Hb_000329_140 Hb_009467_060 Hb_009467_060 Hb_003058_040--Hb_009467_060 Hb_001390_110 Hb_001390_110 Hb_003058_040--Hb_001390_110 Hb_001500_050--Hb_000044_040 Hb_001500_050--Hb_011344_160 Hb_007803_060 Hb_007803_060 Hb_001500_050--Hb_007803_060 Hb_000009_090 Hb_000009_090 Hb_001500_050--Hb_000009_090 Hb_002022_060 Hb_002022_060 Hb_001500_050--Hb_002022_060 Hb_006373_010 Hb_006373_010 Hb_001500_050--Hb_006373_010 Hb_007441_130 Hb_007441_130 Hb_011344_160--Hb_007441_130 Hb_001511_240 Hb_001511_240 Hb_011344_160--Hb_001511_240 Hb_011344_160--Hb_006373_010 Hb_011344_160--Hb_000044_040 Hb_023480_010 Hb_023480_010 Hb_011344_160--Hb_023480_010 Hb_002276_020 Hb_002276_020 Hb_011316_090--Hb_002276_020 Hb_000665_130 Hb_000665_130 Hb_011316_090--Hb_000665_130 Hb_001951_180 Hb_001951_180 Hb_011316_090--Hb_001951_180 Hb_000261_060 Hb_000261_060 Hb_011316_090--Hb_000261_060 Hb_001369_750 Hb_001369_750 Hb_011316_090--Hb_001369_750 Hb_000281_090 Hb_000281_090 Hb_011316_090--Hb_000281_090 Hb_000160_210 Hb_000160_210 Hb_003794_010--Hb_000160_210 Hb_003794_010--Hb_000009_090 Hb_007007_060 Hb_007007_060 Hb_003794_010--Hb_007007_060 Hb_003794_010--Hb_001390_110 Hb_007904_120 Hb_007904_120 Hb_003794_010--Hb_007904_120 Hb_002909_050 Hb_002909_050 Hb_003794_010--Hb_002909_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
222.074 90.2862 65.3433 76.9941 146.845 113.201
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
215.966 73.5298 94.7601 53.1825 195.656

CAGE analysis