Hb_096027_010

Information

Type -
Description -
Location Contig96027: 347-2826
Sequence    

Annotation

kegg
ID rcu:RCOM_0296990
description ankyrin repeat-containing protein, putative
nr
ID XP_002527102.1
description ankyrin repeat-containing protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SM83
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0296990 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_096027_010 0.0 - - ankyrin repeat-containing protein, putative [Ricinus communis]
2 Hb_011853_020 0.0374157871 - - Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]
3 Hb_029977_030 0.0740444334 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
4 Hb_011618_110 0.0751717536 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020-like [Citrus sinensis]
5 Hb_001766_130 0.0755421348 - - zinc finger protein, putative [Ricinus communis]
6 Hb_002636_120 0.085335124 - - Protein bem46, putative [Ricinus communis]
7 Hb_000230_300 0.0910931229 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
8 Hb_001136_040 0.096116601 - - amino acid transporter, putative [Ricinus communis]
9 Hb_005762_010 0.0966643714 - - PREDICTED: protein CHUP1, chloroplastic-like [Populus euphratica]
10 Hb_000003_370 0.0977165911 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
11 Hb_059275_010 0.0995927787 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
12 Hb_000077_280 0.1013477058 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_003339_010 0.1015999367 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
14 Hb_006651_030 0.1047959806 - - unnamed protein product [Homo sapiens]
15 Hb_008054_030 0.1053547394 - - PREDICTED: VQ motif-containing protein 1-like [Jatropha curcas]
16 Hb_001136_160 0.1057212864 - - catalytic, putative [Ricinus communis]
17 Hb_001117_050 0.1083659937 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
18 Hb_000012_350 0.1100676192 transcription factor TF Family: HB PREDICTED: homeobox protein ATH1 [Jatropha curcas]
19 Hb_011574_020 0.1111984622 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
20 Hb_000193_180 0.1137588471 transcription factor TF Family: MYB PREDICTED: transcription factor MYB28-like [Jatropha curcas]

Gene co-expression network

sample Hb_096027_010 Hb_096027_010 Hb_011853_020 Hb_011853_020 Hb_096027_010--Hb_011853_020 Hb_029977_030 Hb_029977_030 Hb_096027_010--Hb_029977_030 Hb_011618_110 Hb_011618_110 Hb_096027_010--Hb_011618_110 Hb_001766_130 Hb_001766_130 Hb_096027_010--Hb_001766_130 Hb_002636_120 Hb_002636_120 Hb_096027_010--Hb_002636_120 Hb_000230_300 Hb_000230_300 Hb_096027_010--Hb_000230_300 Hb_011853_020--Hb_011618_110 Hb_001136_040 Hb_001136_040 Hb_011853_020--Hb_001136_040 Hb_000003_370 Hb_000003_370 Hb_011853_020--Hb_000003_370 Hb_001136_160 Hb_001136_160 Hb_011853_020--Hb_001136_160 Hb_011853_020--Hb_002636_120 Hb_006651_030 Hb_006651_030 Hb_029977_030--Hb_006651_030 Hb_059275_010 Hb_059275_010 Hb_029977_030--Hb_059275_010 Hb_008895_020 Hb_008895_020 Hb_029977_030--Hb_008895_020 Hb_029977_030--Hb_011853_020 Hb_001715_060 Hb_001715_060 Hb_029977_030--Hb_001715_060 Hb_011618_110--Hb_002636_120 Hb_011618_110--Hb_000003_370 Hb_004202_020 Hb_004202_020 Hb_011618_110--Hb_004202_020 Hb_001975_110 Hb_001975_110 Hb_011618_110--Hb_001975_110 Hb_005762_010 Hb_005762_010 Hb_001766_130--Hb_005762_010 Hb_003339_010 Hb_003339_010 Hb_001766_130--Hb_003339_010 Hb_185726_010 Hb_185726_010 Hb_001766_130--Hb_185726_010 Hb_012670_090 Hb_012670_090 Hb_001766_130--Hb_012670_090 Hb_001766_130--Hb_000230_300 Hb_002636_120--Hb_001975_110 Hb_002636_120--Hb_000003_370 Hb_026218_010 Hb_026218_010 Hb_002636_120--Hb_026218_010 Hb_002221_060 Hb_002221_060 Hb_000230_300--Hb_002221_060 Hb_000003_380 Hb_000003_380 Hb_000230_300--Hb_000003_380 Hb_004137_040 Hb_004137_040 Hb_000230_300--Hb_004137_040 Hb_000230_300--Hb_005762_010 Hb_000103_200 Hb_000103_200 Hb_000230_300--Hb_000103_200 Hb_000028_190 Hb_000028_190 Hb_000230_300--Hb_000028_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0730136 0.271063 0.484013 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.226713

CAGE analysis