Hb_096974_010

Information

Type -
Description -
Location Contig96974: 2-625
Sequence    

Annotation

kegg
ID mdm:103451637
description uncharacterized LOC103451637
nr
ID XP_011021259.1
description PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
swissprot
ID -
description -
trembl
ID M1AP01
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010416 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_096974_010 0.0 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
2 Hb_004297_050 0.0368614837 - - cytochrome P450, putative [Ricinus communis]
3 Hb_008725_030 0.0832535534 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003968_010 0.1062542134 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_008948_070 0.1088659446 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
6 Hb_100395_010 0.1194103547 - - ankyrin repeat-containing protein, putative [Ricinus communis]
7 Hb_001971_030 0.1307266686 - - PREDICTED: exonuclease 1 [Jatropha curcas]
8 Hb_003050_170 0.136574115 - - conserved hypothetical protein [Ricinus communis]
9 Hb_023386_060 0.1381357228 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
10 Hb_160653_010 0.1438482897 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
11 Hb_000365_110 0.1452363176 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
12 Hb_005599_010 0.1459463016 - - Protein MLO, putative [Ricinus communis]
13 Hb_054165_010 0.1512973843 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
14 Hb_001002_020 0.1541879453 - - ATP binding protein, putative [Ricinus communis]
15 Hb_043522_010 0.1549920035 - - -
16 Hb_000483_050 0.1561803735 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
17 Hb_000192_030 0.1567708752 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
18 Hb_004544_010 0.1572391694 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
19 Hb_002540_100 0.1575367516 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
20 Hb_003847_090 0.1579974509 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_096974_010 Hb_096974_010 Hb_004297_050 Hb_004297_050 Hb_096974_010--Hb_004297_050 Hb_008725_030 Hb_008725_030 Hb_096974_010--Hb_008725_030 Hb_003968_010 Hb_003968_010 Hb_096974_010--Hb_003968_010 Hb_008948_070 Hb_008948_070 Hb_096974_010--Hb_008948_070 Hb_100395_010 Hb_100395_010 Hb_096974_010--Hb_100395_010 Hb_001971_030 Hb_001971_030 Hb_096974_010--Hb_001971_030 Hb_004297_050--Hb_008725_030 Hb_004297_050--Hb_100395_010 Hb_004297_050--Hb_003968_010 Hb_004297_050--Hb_008948_070 Hb_005599_010 Hb_005599_010 Hb_004297_050--Hb_005599_010 Hb_008725_030--Hb_003968_010 Hb_004544_010 Hb_004544_010 Hb_008725_030--Hb_004544_010 Hb_043522_010 Hb_043522_010 Hb_008725_030--Hb_043522_010 Hb_003050_170 Hb_003050_170 Hb_008725_030--Hb_003050_170 Hb_004096_140 Hb_004096_140 Hb_003968_010--Hb_004096_140 Hb_138705_010 Hb_138705_010 Hb_003968_010--Hb_138705_010 Hb_003968_010--Hb_003050_170 Hb_001019_140 Hb_001019_140 Hb_003968_010--Hb_001019_140 Hb_001846_030 Hb_001846_030 Hb_008948_070--Hb_001846_030 Hb_000953_180 Hb_000953_180 Hb_008948_070--Hb_000953_180 Hb_000192_030 Hb_000192_030 Hb_008948_070--Hb_000192_030 Hb_006478_140 Hb_006478_140 Hb_008948_070--Hb_006478_140 Hb_000365_110 Hb_000365_110 Hb_008948_070--Hb_000365_110 Hb_100395_010--Hb_000192_030 Hb_100395_010--Hb_000953_180 Hb_021142_030 Hb_021142_030 Hb_100395_010--Hb_021142_030 Hb_100395_010--Hb_000365_110 Hb_009385_010 Hb_009385_010 Hb_100395_010--Hb_009385_010 Hb_001410_040 Hb_001410_040 Hb_100395_010--Hb_001410_040 Hb_000771_040 Hb_000771_040 Hb_001971_030--Hb_000771_040 Hb_000483_050 Hb_000483_050 Hb_001971_030--Hb_000483_050 Hb_002973_070 Hb_002973_070 Hb_001971_030--Hb_002973_070 Hb_001971_030--Hb_008948_070 Hb_002774_180 Hb_002774_180 Hb_001971_030--Hb_002774_180 Hb_001971_030--Hb_008725_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.195509 0.29099 0.174331 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0306497 0

CAGE analysis