Hb_097104_010

Information

Type -
Description -
Location Contig97104: 810-1759
Sequence    

Annotation

kegg
ID aly:ARALYDRAFT_487858
description hydrolase, alpha/beta fold family protein
nr
ID 2G4L
description Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
swissprot
ID P52704
description (S)-hydroxynitrile lyase OS=Hevea brasiliensis GN=HNL PE=1 SV=1
trembl
ID O49897
description Alpha-hydroxynitrile lyase OS=Manihot esculenta GN=HNL4 PE=4 SV=1
Gene Ontology
ID GO:0016832
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097104_010 0.0 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
2 Hb_000032_130 0.0077700085 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
3 Hb_006277_090 0.0408560219 - - PREDICTED: uncharacterized protein LOC105649700 [Jatropha curcas]
4 Hb_000103_170 0.0481940258 - - uncharacterized protein LOC100501254 [Zea mays]
5 Hb_099509_010 0.0663413774 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
6 Hb_005253_050 0.0771686979 - - Isoflavone reductase, putative [Ricinus communis]
7 Hb_171810_020 0.0930421553 - - peptide/glutathione transporter OPT1 [Vitis vinifera]
8 Hb_017358_060 0.1082624639 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
9 Hb_003729_050 0.123902202 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
10 Hb_009083_060 0.1239617083 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
11 Hb_000037_210 0.1248053356 - - -
12 Hb_003428_020 0.127390553 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
13 Hb_002701_100 0.1290084035 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
14 Hb_007676_090 0.1317429104 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
15 Hb_036377_010 0.1404773121 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
16 Hb_006355_100 0.1433990123 - - hypothetical protein glysoja_002455 [Glycine soja]
17 Hb_132840_060 0.1442458224 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
18 Hb_008032_010 0.1456862908 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
19 Hb_155874_020 0.1503644021 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
20 Hb_000186_020 0.1615762435 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_097104_010 Hb_097104_010 Hb_000032_130 Hb_000032_130 Hb_097104_010--Hb_000032_130 Hb_006277_090 Hb_006277_090 Hb_097104_010--Hb_006277_090 Hb_000103_170 Hb_000103_170 Hb_097104_010--Hb_000103_170 Hb_099509_010 Hb_099509_010 Hb_097104_010--Hb_099509_010 Hb_005253_050 Hb_005253_050 Hb_097104_010--Hb_005253_050 Hb_171810_020 Hb_171810_020 Hb_097104_010--Hb_171810_020 Hb_000032_130--Hb_006277_090 Hb_000032_130--Hb_000103_170 Hb_000032_130--Hb_099509_010 Hb_000032_130--Hb_005253_050 Hb_000032_130--Hb_171810_020 Hb_006277_090--Hb_000103_170 Hb_006277_090--Hb_099509_010 Hb_009083_060 Hb_009083_060 Hb_006277_090--Hb_009083_060 Hb_000037_210 Hb_000037_210 Hb_006277_090--Hb_000037_210 Hb_000103_170--Hb_099509_010 Hb_000103_170--Hb_009083_060 Hb_000103_170--Hb_000037_210 Hb_099509_010--Hb_009083_060 Hb_099509_010--Hb_000037_210 Hb_003428_020 Hb_003428_020 Hb_099509_010--Hb_003428_020 Hb_005253_050--Hb_171810_020 Hb_036377_010 Hb_036377_010 Hb_005253_050--Hb_036377_010 Hb_017358_060 Hb_017358_060 Hb_005253_050--Hb_017358_060 Hb_005253_050--Hb_006277_090 Hb_171810_020--Hb_036377_010 Hb_004090_010 Hb_004090_010 Hb_171810_020--Hb_004090_010 Hb_171810_020--Hb_017358_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.73641 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.792958

CAGE analysis