Hb_097347_010

Information

Type -
Description -
Location Contig97347: 1804-2288
Sequence    

Annotation

kegg
ID mdm:103409089
description molybdenum cofactor sulfurase-like
nr
ID XP_008346130.1
description PREDICTED: molybdenum cofactor sulfurase-like, partial [Malus domestica]
swissprot
ID Q9C5X8
description Molybdenum cofactor sulfurase OS=Arabidopsis thaliana GN=ABA3 PE=1 SV=1
trembl
ID A0A061F8U0
description Molybdenum cofactor sulfurase (LOS5) (ABA3) isoform 2 OS=Theobroma cacao GN=TCM_032386 PE=4 SV=1
Gene Ontology
ID GO:0003824
description molybdenum cofactor sulfurase isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097347_010 0.0 - - PREDICTED: molybdenum cofactor sulfurase-like, partial [Malus domestica]
2 Hb_009476_140 0.1799789342 transcription factor TF Family: bHLH hypothetical protein RCOM_0838610 [Ricinus communis]
3 Hb_002876_290 0.18261818 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
4 Hb_054586_020 0.1950329938 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
5 Hb_063480_020 0.2030258972 - - unnamed protein product [Vitis vinifera]
6 Hb_049160_010 0.2035715639 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
7 Hb_006588_150 0.2038214893 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
8 Hb_001691_150 0.2112209016 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Jatropha curcas]
9 Hb_141212_010 0.2166159138 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
10 Hb_037767_010 0.2197294697 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
11 Hb_003371_230 0.2206039481 - - lactase-like b precursor [Scleropages formosus]
12 Hb_012506_010 0.2238943046 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
13 Hb_000521_270 0.2273453614 - - PREDICTED: protein EMSY-LIKE 3 [Jatropha curcas]
14 Hb_145629_010 0.2323533558 - - -
15 Hb_007333_040 0.2329031268 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
16 Hb_076875_020 0.2359965085 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
17 Hb_022400_010 0.2393641841 - - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein [Theobroma cacao]
18 Hb_002084_010 0.2397140688 - - hypothetical protein VITISV_017990 [Vitis vinifera]
19 Hb_073395_010 0.2397827839 - - -
20 Hb_000230_040 0.2401694743 - - PREDICTED: protein MON2 homolog isoform X2 [Vitis vinifera]

Gene co-expression network

sample Hb_097347_010 Hb_097347_010 Hb_009476_140 Hb_009476_140 Hb_097347_010--Hb_009476_140 Hb_002876_290 Hb_002876_290 Hb_097347_010--Hb_002876_290 Hb_054586_020 Hb_054586_020 Hb_097347_010--Hb_054586_020 Hb_063480_020 Hb_063480_020 Hb_097347_010--Hb_063480_020 Hb_049160_010 Hb_049160_010 Hb_097347_010--Hb_049160_010 Hb_006588_150 Hb_006588_150 Hb_097347_010--Hb_006588_150 Hb_009476_140--Hb_002876_290 Hb_009476_140--Hb_006588_150 Hb_001369_440 Hb_001369_440 Hb_009476_140--Hb_001369_440 Hb_060715_010 Hb_060715_010 Hb_009476_140--Hb_060715_010 Hb_003211_010 Hb_003211_010 Hb_009476_140--Hb_003211_010 Hb_002876_290--Hb_006588_150 Hb_002876_290--Hb_003211_010 Hb_000025_340 Hb_000025_340 Hb_002876_290--Hb_000025_340 Hb_073395_010 Hb_073395_010 Hb_002876_290--Hb_073395_010 Hb_037767_010 Hb_037767_010 Hb_002876_290--Hb_037767_010 Hb_001386_140 Hb_001386_140 Hb_054586_020--Hb_001386_140 Hb_006132_100 Hb_006132_100 Hb_054586_020--Hb_006132_100 Hb_010565_010 Hb_010565_010 Hb_054586_020--Hb_010565_010 Hb_058702_010 Hb_058702_010 Hb_054586_020--Hb_058702_010 Hb_007333_040 Hb_007333_040 Hb_054586_020--Hb_007333_040 Hb_030328_010 Hb_030328_010 Hb_054586_020--Hb_030328_010 Hb_054885_020 Hb_054885_020 Hb_063480_020--Hb_054885_020 Hb_000406_110 Hb_000406_110 Hb_063480_020--Hb_000406_110 Hb_000537_140 Hb_000537_140 Hb_063480_020--Hb_000537_140 Hb_063480_020--Hb_006588_150 Hb_002837_110 Hb_002837_110 Hb_063480_020--Hb_002837_110 Hb_063480_020--Hb_049160_010 Hb_157846_010 Hb_157846_010 Hb_049160_010--Hb_157846_010 Hb_000497_010 Hb_000497_010 Hb_049160_010--Hb_000497_010 Hb_141918_010 Hb_141918_010 Hb_049160_010--Hb_141918_010 Hb_001907_100 Hb_001907_100 Hb_049160_010--Hb_001907_100 Hb_010727_010 Hb_010727_010 Hb_049160_010--Hb_010727_010 Hb_000740_110 Hb_000740_110 Hb_006588_150--Hb_000740_110 Hb_006588_150--Hb_001369_440 Hb_006588_150--Hb_003211_010 Hb_022400_010 Hb_022400_010 Hb_006588_150--Hb_022400_010 Hb_005214_090 Hb_005214_090 Hb_006588_150--Hb_005214_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6758 22.7774 0.732712 18.7458 2.9794 37.0638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.46407 11.8205 2.26411 14.6353 2.40464

CAGE analysis