Hb_097433_030

Information

Type -
Description -
Location Contig97433: 12006-13318
Sequence    

Annotation

kegg
ID cit:102619811
description receptor-like protein 12-like
nr
ID KDO41113.1
description hypothetical protein CISIN_1g0017192mg, partial [Citrus sinensis]
swissprot
ID Q723X5
description Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365) GN=inlI PE=3 SV=1
trembl
ID A0A067DE40
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0017192mg PE=4 SV=1
Gene Ontology
ID GO:0005515
description receptor like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097433_030 0.0 - - hypothetical protein CISIN_1g0017192mg, partial [Citrus sinensis]
2 Hb_021374_020 0.1302668854 - - PREDICTED: uncharacterized protein LOC101298847, partial [Fragaria vesca subsp. vesca]
3 Hb_143004_010 0.1579696 - - PREDICTED: uncharacterized J domain-containing protein C1071.09c [Eucalyptus grandis]
4 Hb_033623_030 0.1718093394 - - PREDICTED: isoprene synthase, chloroplastic-like isoform X1 [Jatropha curcas]
5 Hb_013420_050 0.1734888067 - - hypothetical protein (mitochondrion) [Vicia faba]
6 Hb_171685_080 0.173609243 - - unknown [Allium cepa]
7 Hb_012163_050 0.1765472487 - - ATPase subunit [Medicago truncatula]
8 Hb_001124_170 0.1785146219 - - putative retrotransposon protein [Phyllostachys edulis]
9 Hb_002495_050 0.1793023517 - - PREDICTED: uncharacterized protein LOC105639161 [Jatropha curcas]
10 Hb_000284_050 0.1807588453 - - hypothetical protein L484_026849 [Morus notabilis]
11 Hb_004161_040 0.1817663044 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Populus euphratica]
12 Hb_171685_060 0.1817854819 - - PREDICTED: cytochrome c oxidase subunit 2 [Pyrus x bretschneideri]
13 Hb_104735_010 0.1834788357 - - cytochrome c biogenesis C (mitochondrion) [Hevea brasiliensis]
14 Hb_041813_030 0.1836773676 - - cytochrome oxidase subunit 1, partial (mitochondrion) [Calochone redingii]
15 Hb_010053_050 0.184163363 - - hypothetical protein POPTR_0530s002102g, partial [Populus trichocarpa]
16 Hb_010053_060 0.1882064352 - - ATP-binding cassette transporter, putative [Ricinus communis]
17 Hb_013420_090 0.1903300892 - - BnaCnng13090D [Brassica napus]
18 Hb_034455_010 0.1953059497 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_002041_010 0.1958158728 - - -
20 Hb_156746_010 0.1959229245 - - ATP synthase F1 subunit 1 (mitochondrion) [Hevea brasiliensis]

Gene co-expression network

sample Hb_097433_030 Hb_097433_030 Hb_021374_020 Hb_021374_020 Hb_097433_030--Hb_021374_020 Hb_143004_010 Hb_143004_010 Hb_097433_030--Hb_143004_010 Hb_033623_030 Hb_033623_030 Hb_097433_030--Hb_033623_030 Hb_013420_050 Hb_013420_050 Hb_097433_030--Hb_013420_050 Hb_171685_080 Hb_171685_080 Hb_097433_030--Hb_171685_080 Hb_012163_050 Hb_012163_050 Hb_097433_030--Hb_012163_050 Hb_001124_170 Hb_001124_170 Hb_021374_020--Hb_001124_170 Hb_002495_050 Hb_002495_050 Hb_021374_020--Hb_002495_050 Hb_021374_020--Hb_143004_010 Hb_104735_010 Hb_104735_010 Hb_021374_020--Hb_104735_010 Hb_013420_020 Hb_013420_020 Hb_021374_020--Hb_013420_020 Hb_000789_210 Hb_000789_210 Hb_143004_010--Hb_000789_210 Hb_000668_030 Hb_000668_030 Hb_143004_010--Hb_000668_030 Hb_001115_060 Hb_001115_060 Hb_143004_010--Hb_001115_060 Hb_004984_090 Hb_004984_090 Hb_143004_010--Hb_004984_090 Hb_002281_060 Hb_002281_060 Hb_143004_010--Hb_002281_060 Hb_000627_060 Hb_000627_060 Hb_033623_030--Hb_000627_060 Hb_002704_090 Hb_002704_090 Hb_033623_030--Hb_002704_090 Hb_002093_010 Hb_002093_010 Hb_033623_030--Hb_002093_010 Hb_006435_020 Hb_006435_020 Hb_033623_030--Hb_006435_020 Hb_031194_030 Hb_031194_030 Hb_033623_030--Hb_031194_030 Hb_007741_060 Hb_007741_060 Hb_033623_030--Hb_007741_060 Hb_156746_010 Hb_156746_010 Hb_013420_050--Hb_156746_010 Hb_006040_020 Hb_006040_020 Hb_013420_050--Hb_006040_020 Hb_013420_050--Hb_171685_080 Hb_006040_010 Hb_006040_010 Hb_013420_050--Hb_006040_010 Hb_042463_070 Hb_042463_070 Hb_013420_050--Hb_042463_070 Hb_006040_030 Hb_006040_030 Hb_013420_050--Hb_006040_030 Hb_171685_080--Hb_006040_010 Hb_171685_080--Hb_006040_020 Hb_003688_030 Hb_003688_030 Hb_171685_080--Hb_003688_030 Hb_008085_020 Hb_008085_020 Hb_171685_080--Hb_008085_020 Hb_171685_080--Hb_006040_030 Hb_171685_060 Hb_171685_060 Hb_012163_050--Hb_171685_060 Hb_012163_050--Hb_013420_020 Hb_012163_050--Hb_156746_010 Hb_042463_030 Hb_042463_030 Hb_012163_050--Hb_042463_030 Hb_012163_050--Hb_006040_030 Hb_012163_050--Hb_042463_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0770546 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.150181 0.0356679 2.1586

CAGE analysis