Hb_097495_010

Information

Type -
Description -
Location Contig97495: 1-791
Sequence    

Annotation

kegg
ID rcu:RCOM_1569840
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative (EC:5.4.2.1)
nr
ID XP_012088136.1
description PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
swissprot
ID A8AC98
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=apgM PE=3 SV=1
trembl
ID B9S5D4
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative OS=Ricinus communis GN=RCOM_1569840 PE=4 SV=1
Gene Ontology
ID GO:0046537
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097495_010 0.0 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
2 Hb_000585_110 0.0988947503 - - PREDICTED: probable protein phosphatase 2C 66 [Jatropha curcas]
3 Hb_007441_310 0.1043964058 - - PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Jatropha curcas]
4 Hb_019654_020 0.1055848366 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
5 Hb_001663_040 0.1074523205 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
6 Hb_000049_180 0.1083446208 - - aromatic amino acid decarboxylase, putative [Ricinus communis]
7 Hb_021943_090 0.1091986076 - - PREDICTED: probable methylenetetrahydrofolate reductase [Jatropha curcas]
8 Hb_008147_080 0.1113543654 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
9 Hb_008375_010 0.1155573339 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Pyrus x bretschneideri]
10 Hb_003875_030 0.1159184396 - - PREDICTED: probable plastidic glucose transporter 1 [Jatropha curcas]
11 Hb_000116_250 0.1166347557 - - PREDICTED: DNA mismatch repair protein MLH3 [Jatropha curcas]
12 Hb_006829_060 0.1166621876 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
13 Hb_003440_020 0.116982617 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_000638_070 0.1176628933 - - PREDICTED: protein trichome birefringence-like 14 [Jatropha curcas]
15 Hb_000057_110 0.11930111 - - PREDICTED: kinesin-13A [Jatropha curcas]
16 Hb_001789_200 0.1218026699 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
17 Hb_002902_140 0.1223855047 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
18 Hb_003355_010 0.1227134713 - - Heat shock 70 kDa protein, putative [Ricinus communis]
19 Hb_055690_010 0.123475673 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
20 Hb_000979_130 0.1237174522 - - PREDICTED: phosphoglucomutase, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_097495_010 Hb_097495_010 Hb_000585_110 Hb_000585_110 Hb_097495_010--Hb_000585_110 Hb_007441_310 Hb_007441_310 Hb_097495_010--Hb_007441_310 Hb_019654_020 Hb_019654_020 Hb_097495_010--Hb_019654_020 Hb_001663_040 Hb_001663_040 Hb_097495_010--Hb_001663_040 Hb_000049_180 Hb_000049_180 Hb_097495_010--Hb_000049_180 Hb_021943_090 Hb_021943_090 Hb_097495_010--Hb_021943_090 Hb_055690_010 Hb_055690_010 Hb_000585_110--Hb_055690_010 Hb_002249_080 Hb_002249_080 Hb_000585_110--Hb_002249_080 Hb_000007_090 Hb_000007_090 Hb_000585_110--Hb_000007_090 Hb_000585_110--Hb_007441_310 Hb_000585_110--Hb_019654_020 Hb_000417_390 Hb_000417_390 Hb_000585_110--Hb_000417_390 Hb_008375_010 Hb_008375_010 Hb_007441_310--Hb_008375_010 Hb_032631_070 Hb_032631_070 Hb_007441_310--Hb_032631_070 Hb_000397_150 Hb_000397_150 Hb_007441_310--Hb_000397_150 Hb_007441_310--Hb_055690_010 Hb_001195_770 Hb_001195_770 Hb_007441_310--Hb_001195_770 Hb_000367_180 Hb_000367_180 Hb_019654_020--Hb_000367_180 Hb_000007_060 Hb_000007_060 Hb_019654_020--Hb_000007_060 Hb_015884_020 Hb_015884_020 Hb_019654_020--Hb_015884_020 Hb_000979_130 Hb_000979_130 Hb_019654_020--Hb_000979_130 Hb_003058_100 Hb_003058_100 Hb_019654_020--Hb_003058_100 Hb_003875_030 Hb_003875_030 Hb_001663_040--Hb_003875_030 Hb_000181_350 Hb_000181_350 Hb_001663_040--Hb_000181_350 Hb_000638_070 Hb_000638_070 Hb_001663_040--Hb_000638_070 Hb_002392_010 Hb_002392_010 Hb_001663_040--Hb_002392_010 Hb_012573_050 Hb_012573_050 Hb_001663_040--Hb_012573_050 Hb_000116_130 Hb_000116_130 Hb_001663_040--Hb_000116_130 Hb_001976_030 Hb_001976_030 Hb_000049_180--Hb_001976_030 Hb_001628_120 Hb_001628_120 Hb_000049_180--Hb_001628_120 Hb_000049_160 Hb_000049_160 Hb_000049_180--Hb_000049_160 Hb_000049_180--Hb_007441_310 Hb_000096_190 Hb_000096_190 Hb_000049_180--Hb_000096_190 Hb_042083_040 Hb_042083_040 Hb_000049_180--Hb_042083_040 Hb_003994_030 Hb_003994_030 Hb_021943_090--Hb_003994_030 Hb_021943_090--Hb_000979_130 Hb_021943_090--Hb_000367_180 Hb_000260_510 Hb_000260_510 Hb_021943_090--Hb_000260_510 Hb_000800_090 Hb_000800_090 Hb_021943_090--Hb_000800_090 Hb_000665_180 Hb_000665_180 Hb_021943_090--Hb_000665_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.5833 1.77925 13.7429 15.1522 2.68519 4.3133
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.40861 6.47612 6.04108 10.9416 18.3229

CAGE analysis