Hb_097908_010

Information

Type -
Description -
Location Contig97908: 1-1074
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001474mg
description hypothetical protein
nr
ID XP_012080346.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
swissprot
ID Q8GYA4
description Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3
trembl
ID M5WX54
description Serine/threonine-protein kinase OS=Prunus persica GN=PRUPE_ppa001474mg PE=3 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097908_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
2 Hb_004774_060 0.0713979374 - - -
3 Hb_004055_180 0.076991981 - - cell wall invertase [Manihot esculenta]
4 Hb_175968_010 0.0941290394 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
5 Hb_001464_010 0.0941590344 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
6 Hb_000659_010 0.098974926 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
7 Hb_007417_020 0.0998635651 - - Reticuline oxidase precursor, putative [Ricinus communis]
8 Hb_000563_610 0.1049688764 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
9 Hb_033363_080 0.1105006804 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
10 Hb_029571_010 0.1114717659 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
11 Hb_004222_010 0.1117198488 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
12 Hb_001279_220 0.1119902118 - - protein binding protein, putative [Ricinus communis]
13 Hb_004712_080 0.1191647916 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
14 Hb_002248_020 0.1200499729 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
15 Hb_000487_150 0.124387786 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
16 Hb_010407_120 0.1261142347 - - PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
17 Hb_135392_010 0.1279514122 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
18 Hb_001134_040 0.1286222159 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
19 Hb_000466_090 0.1304347181 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
20 Hb_004195_240 0.1330676861 - - Peroxidase 72 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_097908_010 Hb_097908_010 Hb_004774_060 Hb_004774_060 Hb_097908_010--Hb_004774_060 Hb_004055_180 Hb_004055_180 Hb_097908_010--Hb_004055_180 Hb_175968_010 Hb_175968_010 Hb_097908_010--Hb_175968_010 Hb_001464_010 Hb_001464_010 Hb_097908_010--Hb_001464_010 Hb_000659_010 Hb_000659_010 Hb_097908_010--Hb_000659_010 Hb_007417_020 Hb_007417_020 Hb_097908_010--Hb_007417_020 Hb_004774_060--Hb_175968_010 Hb_001279_220 Hb_001279_220 Hb_004774_060--Hb_001279_220 Hb_004774_060--Hb_004055_180 Hb_033363_080 Hb_033363_080 Hb_004774_060--Hb_033363_080 Hb_004774_060--Hb_000659_010 Hb_004055_180--Hb_001464_010 Hb_000563_610 Hb_000563_610 Hb_004055_180--Hb_000563_610 Hb_004055_180--Hb_175968_010 Hb_004055_180--Hb_007417_020 Hb_175968_010--Hb_001279_220 Hb_175968_010--Hb_000659_010 Hb_004222_010 Hb_004222_010 Hb_175968_010--Hb_004222_010 Hb_001464_010--Hb_007417_020 Hb_135392_010 Hb_135392_010 Hb_001464_010--Hb_135392_010 Hb_001134_040 Hb_001134_040 Hb_001464_010--Hb_001134_040 Hb_007491_010 Hb_007491_010 Hb_001464_010--Hb_007491_010 Hb_022815_020 Hb_022815_020 Hb_000659_010--Hb_022815_020 Hb_000659_010--Hb_004222_010 Hb_001003_020 Hb_001003_020 Hb_000659_010--Hb_001003_020 Hb_035726_020 Hb_035726_020 Hb_000659_010--Hb_035726_020 Hb_000659_010--Hb_001279_220 Hb_007417_020--Hb_135392_010 Hb_007417_020--Hb_001134_040 Hb_007417_020--Hb_007491_010 Hb_003090_070 Hb_003090_070 Hb_007417_020--Hb_003090_070 Hb_002805_230 Hb_002805_230 Hb_007417_020--Hb_002805_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.100535 0.267942 0.174346 0.0267689 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.82014 0.207633

CAGE analysis