Hb_098795_010

Information

Type -
Description -
Location Contig98795: 13890-15596
Sequence    

Annotation

kegg
ID pop:POPTR_0011s15310g
description POPTRDRAFT_889091; hypothetical protein
nr
ID XP_012084333.1
description PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
swissprot
ID Q05964
description Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1
trembl
ID A0A067JUV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19834 PE=3 SV=1
Gene Ontology
ID GO:0016706
description hyoscyamine 6-dioxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_098795_010 0.0 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
2 Hb_000441_170 0.0967316357 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
3 Hb_006538_050 0.1013611808 - - hypothetical protein RCOM_1308310 [Ricinus communis]
4 Hb_002272_160 0.1045731346 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
5 Hb_000003_470 0.1047440823 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003786_060 0.1055331495 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
7 Hb_003052_070 0.1068808805 - - PREDICTED: peroxidase 11 [Jatropha curcas]
8 Hb_000175_480 0.1083436766 - - hypothetical protein JCGZ_06165 [Jatropha curcas]
9 Hb_001328_110 0.1109702435 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
10 Hb_002232_400 0.1131556408 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
11 Hb_000617_340 0.1138088526 - - respiratory burst oxidase B [Manihot esculenta]
12 Hb_000567_310 0.1139559278 - - Miraculin precursor, putative [Ricinus communis]
13 Hb_002900_070 0.1152459544 - - conserved hypothetical protein [Ricinus communis]
14 Hb_025526_090 0.1153218647 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
15 Hb_000120_710 0.1213617216 - - unnamed protein product [Vitis vinifera]
16 Hb_003855_070 0.1227443929 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
17 Hb_007747_030 0.1251347454 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
18 Hb_008705_070 0.1287644528 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
19 Hb_027288_010 0.1332969721 - - mutt domain protein, putative [Ricinus communis]
20 Hb_003253_020 0.1339811488 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_098795_010 Hb_098795_010 Hb_000441_170 Hb_000441_170 Hb_098795_010--Hb_000441_170 Hb_006538_050 Hb_006538_050 Hb_098795_010--Hb_006538_050 Hb_002272_160 Hb_002272_160 Hb_098795_010--Hb_002272_160 Hb_000003_470 Hb_000003_470 Hb_098795_010--Hb_000003_470 Hb_003786_060 Hb_003786_060 Hb_098795_010--Hb_003786_060 Hb_003052_070 Hb_003052_070 Hb_098795_010--Hb_003052_070 Hb_002900_070 Hb_002900_070 Hb_000441_170--Hb_002900_070 Hb_002232_400 Hb_002232_400 Hb_000441_170--Hb_002232_400 Hb_006006_070 Hb_006006_070 Hb_000441_170--Hb_006006_070 Hb_000441_170--Hb_002272_160 Hb_076895_020 Hb_076895_020 Hb_000441_170--Hb_076895_020 Hb_006538_050--Hb_003786_060 Hb_000120_710 Hb_000120_710 Hb_006538_050--Hb_000120_710 Hb_001328_110 Hb_001328_110 Hb_006538_050--Hb_001328_110 Hb_006538_050--Hb_003052_070 Hb_000567_310 Hb_000567_310 Hb_006538_050--Hb_000567_310 Hb_000617_340 Hb_000617_340 Hb_006538_050--Hb_000617_340 Hb_027288_010 Hb_027288_010 Hb_002272_160--Hb_027288_010 Hb_007483_030 Hb_007483_030 Hb_002272_160--Hb_007483_030 Hb_002272_160--Hb_003052_070 Hb_007747_030 Hb_007747_030 Hb_002272_160--Hb_007747_030 Hb_002272_160--Hb_000567_310 Hb_025526_090 Hb_025526_090 Hb_000003_470--Hb_025526_090 Hb_003855_070 Hb_003855_070 Hb_000003_470--Hb_003855_070 Hb_000003_470--Hb_001328_110 Hb_016172_010 Hb_016172_010 Hb_000003_470--Hb_016172_010 Hb_011856_010 Hb_011856_010 Hb_000003_470--Hb_011856_010 Hb_008705_070 Hb_008705_070 Hb_000003_470--Hb_008705_070 Hb_003786_060--Hb_003052_070 Hb_003786_060--Hb_007747_030 Hb_003786_060--Hb_000567_310 Hb_003786_060--Hb_001328_110 Hb_000933_200 Hb_000933_200 Hb_003786_060--Hb_000933_200 Hb_003052_070--Hb_000567_310 Hb_003052_070--Hb_001328_110 Hb_003052_070--Hb_027288_010 Hb_003052_070--Hb_007747_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.036871 0.196282 0.084162 0.157485 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.44768 0

CAGE analysis