Hb_098993_010

Information

Type -
Description -
Location Contig98993: 1501-6588
Sequence    

Annotation

kegg
ID vvi:100255003
description chaperone protein dnaJ 72
nr
ID XP_012072688.1
description PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
swissprot
ID Q0WTI8
description Chaperone protein dnaJ 72 OS=Arabidopsis thaliana GN=ATJ72 PE=2 SV=1
trembl
ID D7TQ75
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64711: 366-521 , PASA_asmbl_64712: 1517-1706 , PASA_asmbl_64713: 1958-6624
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_098993_010 0.0 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
2 Hb_003297_030 0.0790081389 - - PREDICTED: uncharacterized protein LOC105640530 [Jatropha curcas]
3 Hb_007575_040 0.0832289088 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1-like [Jatropha curcas]
4 Hb_000025_480 0.0867576315 transcription factor TF Family: HB PREDICTED: homeobox protein 10 isoform X1 [Jatropha curcas]
5 Hb_007943_080 0.0873419751 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
6 Hb_185467_020 0.0891943465 - - Cucumisin precursor, putative [Ricinus communis]
7 Hb_007558_140 0.0919089925 - - PREDICTED: phospholipid-transporting ATPase 1-like [Jatropha curcas]
8 Hb_002631_050 0.0932320305 - - membrane associated ring finger 1,8, putative [Ricinus communis]
9 Hb_000186_240 0.0951397493 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
10 Hb_010638_020 0.0952158875 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
11 Hb_011918_080 0.0954059337 - - PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]
12 Hb_010863_080 0.0963362237 - - PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Jatropha curcas]
13 Hb_011174_070 0.0965270004 - - PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Jatropha curcas]
14 Hb_002890_340 0.0966837026 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
15 Hb_182026_020 0.0995769577 - - PREDICTED: SUN domain-containing protein 3-like [Jatropha curcas]
16 Hb_153258_010 0.1000351327 - - PREDICTED: uncharacterized protein LOC105642325 [Jatropha curcas]
17 Hb_000997_210 0.1022999461 - - PREDICTED: protein transport protein sec23-1 [Jatropha curcas]
18 Hb_012340_010 0.1024747482 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
19 Hb_000120_050 0.1049261251 - - PREDICTED: protein ELF4-LIKE 1 [Jatropha curcas]
20 Hb_001635_100 0.1057215507 - - PREDICTED: dentin sialophosphoprotein isoform X5 [Populus euphratica]

Gene co-expression network

sample Hb_098993_010 Hb_098993_010 Hb_003297_030 Hb_003297_030 Hb_098993_010--Hb_003297_030 Hb_007575_040 Hb_007575_040 Hb_098993_010--Hb_007575_040 Hb_000025_480 Hb_000025_480 Hb_098993_010--Hb_000025_480 Hb_007943_080 Hb_007943_080 Hb_098993_010--Hb_007943_080 Hb_185467_020 Hb_185467_020 Hb_098993_010--Hb_185467_020 Hb_007558_140 Hb_007558_140 Hb_098993_010--Hb_007558_140 Hb_010863_080 Hb_010863_080 Hb_003297_030--Hb_010863_080 Hb_003609_040 Hb_003609_040 Hb_003297_030--Hb_003609_040 Hb_001635_100 Hb_001635_100 Hb_003297_030--Hb_001635_100 Hb_000179_210 Hb_000179_210 Hb_003297_030--Hb_000179_210 Hb_000030_010 Hb_000030_010 Hb_003297_030--Hb_000030_010 Hb_010638_020 Hb_010638_020 Hb_007575_040--Hb_010638_020 Hb_000186_240 Hb_000186_240 Hb_007575_040--Hb_000186_240 Hb_007575_040--Hb_010863_080 Hb_007575_040--Hb_003297_030 Hb_000352_110 Hb_000352_110 Hb_007575_040--Hb_000352_110 Hb_002357_040 Hb_002357_040 Hb_000025_480--Hb_002357_040 Hb_007760_030 Hb_007760_030 Hb_000025_480--Hb_007760_030 Hb_011174_070 Hb_011174_070 Hb_000025_480--Hb_011174_070 Hb_000538_210 Hb_000538_210 Hb_000025_480--Hb_000538_210 Hb_000110_160 Hb_000110_160 Hb_000025_480--Hb_000110_160 Hb_000358_080 Hb_000358_080 Hb_007943_080--Hb_000358_080 Hb_000120_050 Hb_000120_050 Hb_007943_080--Hb_000120_050 Hb_007943_080--Hb_007558_140 Hb_003861_080 Hb_003861_080 Hb_007943_080--Hb_003861_080 Hb_000134_350 Hb_000134_350 Hb_007943_080--Hb_000134_350 Hb_008453_150 Hb_008453_150 Hb_185467_020--Hb_008453_150 Hb_002631_050 Hb_002631_050 Hb_185467_020--Hb_002631_050 Hb_002874_070 Hb_002874_070 Hb_185467_020--Hb_002874_070 Hb_000803_150 Hb_000803_150 Hb_185467_020--Hb_000803_150 Hb_001936_050 Hb_001936_050 Hb_185467_020--Hb_001936_050 Hb_001981_070 Hb_001981_070 Hb_185467_020--Hb_001981_070 Hb_011918_080 Hb_011918_080 Hb_007558_140--Hb_011918_080 Hb_002477_160 Hb_002477_160 Hb_007558_140--Hb_002477_160 Hb_002307_100 Hb_002307_100 Hb_007558_140--Hb_002307_100 Hb_001085_170 Hb_001085_170 Hb_007558_140--Hb_001085_170 Hb_153258_010 Hb_153258_010 Hb_007558_140--Hb_153258_010 Hb_000997_210 Hb_000997_210 Hb_007558_140--Hb_000997_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
71.7034 13.8749 11.4371 13.4643 86.5738 72.5164
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.0933 45.6283 98.646 27.2084 12.0246

CAGE analysis