Hb_099084_010

Information

Type -
Description -
Location Contig99084: 405-1334
Sequence    

Annotation

kegg
ID tcc:TCM_003164
description hypothetical protein
nr
ID XP_012075160.1
description PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061DPQ5
description Uncharacterized protein OS=Theobroma cacao GN=TCM_003164 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099084_010 0.0 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
2 Hb_003177_070 0.1580638388 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
3 Hb_027043_010 0.169488 - - PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 [Jatropha curcas]
4 Hb_000809_020 0.1747293574 desease resistance Gene Name: RPW8 leucine-rich repeat-containing protein, putative [Ricinus communis]
5 Hb_000045_160 0.1772930258 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
6 Hb_111552_010 0.1783626036 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
7 Hb_001009_120 0.1798036835 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
8 Hb_002307_080 0.1822806224 - - conserved hypothetical protein [Ricinus communis]
9 Hb_069591_010 0.1854747238 - - -
10 Hb_004774_090 0.1857046479 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
11 Hb_000137_020 0.1864353979 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
12 Hb_000586_020 0.1864895217 desease resistance Gene Name: NB-ARC hypothetical protein F383_02497 [Gossypium arboreum]
13 Hb_007849_050 0.1882002114 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 [Jatropha curcas]
14 Hb_000025_610 0.1893143751 - - annexin, putative [Ricinus communis]
15 Hb_000111_370 0.1904606815 - - PREDICTED: cation/H(+) antiporter 2-like [Jatropha curcas]
16 Hb_000094_080 0.1905703231 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
17 Hb_000421_110 0.1907894612 - - PREDICTED: V-type proton ATPase subunit a1 isoform X2 [Jatropha curcas]
18 Hb_000956_040 0.1934841346 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
19 Hb_000640_190 0.1937377553 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
20 Hb_000805_200 0.194510489 - - PREDICTED: telomere repeat-binding protein 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_099084_010 Hb_099084_010 Hb_003177_070 Hb_003177_070 Hb_099084_010--Hb_003177_070 Hb_027043_010 Hb_027043_010 Hb_099084_010--Hb_027043_010 Hb_000809_020 Hb_000809_020 Hb_099084_010--Hb_000809_020 Hb_000045_160 Hb_000045_160 Hb_099084_010--Hb_000045_160 Hb_111552_010 Hb_111552_010 Hb_099084_010--Hb_111552_010 Hb_001009_120 Hb_001009_120 Hb_099084_010--Hb_001009_120 Hb_000815_310 Hb_000815_310 Hb_003177_070--Hb_000815_310 Hb_003177_070--Hb_001009_120 Hb_033152_090 Hb_033152_090 Hb_003177_070--Hb_033152_090 Hb_000418_050 Hb_000418_050 Hb_003177_070--Hb_000418_050 Hb_000421_110 Hb_000421_110 Hb_003177_070--Hb_000421_110 Hb_003777_130 Hb_003777_130 Hb_003177_070--Hb_003777_130 Hb_000477_070 Hb_000477_070 Hb_027043_010--Hb_000477_070 Hb_002849_050 Hb_002849_050 Hb_027043_010--Hb_002849_050 Hb_000649_330 Hb_000649_330 Hb_027043_010--Hb_000649_330 Hb_052135_020 Hb_052135_020 Hb_027043_010--Hb_052135_020 Hb_002259_220 Hb_002259_220 Hb_027043_010--Hb_002259_220 Hb_000015_150 Hb_000015_150 Hb_027043_010--Hb_000015_150 Hb_007527_010 Hb_007527_010 Hb_000809_020--Hb_007527_010 Hb_011618_070 Hb_011618_070 Hb_000809_020--Hb_011618_070 Hb_000243_260 Hb_000243_260 Hb_000809_020--Hb_000243_260 Hb_000809_020--Hb_111552_010 Hb_012539_060 Hb_012539_060 Hb_000809_020--Hb_012539_060 Hb_012632_010 Hb_012632_010 Hb_000809_020--Hb_012632_010 Hb_000640_190 Hb_000640_190 Hb_000045_160--Hb_000640_190 Hb_011930_100 Hb_011930_100 Hb_000045_160--Hb_011930_100 Hb_000045_160--Hb_033152_090 Hb_088584_010 Hb_088584_010 Hb_000045_160--Hb_088584_010 Hb_002249_020 Hb_002249_020 Hb_000045_160--Hb_002249_020 Hb_000045_160--Hb_000815_310 Hb_004774_090 Hb_004774_090 Hb_111552_010--Hb_004774_090 Hb_001178_030 Hb_001178_030 Hb_111552_010--Hb_001178_030 Hb_000452_030 Hb_000452_030 Hb_111552_010--Hb_000452_030 Hb_000586_020 Hb_000586_020 Hb_111552_010--Hb_000586_020 Hb_006846_170 Hb_006846_170 Hb_111552_010--Hb_006846_170 Hb_000956_040 Hb_000956_040 Hb_111552_010--Hb_000956_040 Hb_001009_120--Hb_033152_090 Hb_001009_120--Hb_000640_190 Hb_001009_120--Hb_000956_040 Hb_006452_180 Hb_006452_180 Hb_001009_120--Hb_006452_180 Hb_004319_050 Hb_004319_050 Hb_001009_120--Hb_004319_050 Hb_009178_010 Hb_009178_010 Hb_001009_120--Hb_009178_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.18844 0.735524 0.797486 0.398899 0.135126 0.268999
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.097265 0.442415 0.2357 0.392968

CAGE analysis