Hb_099198_010

Information

Type -
Description -
Location Contig99198: 796-2959
Sequence    

Annotation

kegg
ID mtr:MTR_8g089000
description Receptor-like protein kinase
nr
ID XP_009618939.1
description PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
swissprot
ID Q42371
description LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1
trembl
ID G7L9I8
description Leucine-rich receptor-like kinase family protein OS=Medicago truncatula GN=MTR_8g089000 PE=4 SV=1
Gene Ontology
ID GO:0003824
description receptor-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099198_010 0.0 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
2 Hb_084495_010 0.0187304102 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
3 Hb_003121_020 0.0517085111 - - secretory peroxidase PX3 [Manihot esculenta]
4 Hb_014113_010 0.0856584366 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
5 Hb_010839_070 0.1414945012 - - uncharacterized protein LOC100810725 [Glycine max]
6 Hb_000407_110 0.145276594 - - ripening-induced ACC oxidase [Carica papaya]
7 Hb_001652_050 0.1546556571 - - -
8 Hb_003581_240 0.1546640954 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_000640_270 0.1568953104 - - PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 30 [Jatropha curcas]
10 Hb_183700_010 0.1571779284 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_002435_080 0.1593653356 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001571_010 0.1604963428 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
13 Hb_000327_300 0.1624574643 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
14 Hb_004586_080 0.162961407 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
15 Hb_006919_010 0.1636585689 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Vitis vinifera]
16 Hb_014387_040 0.1642375576 - - PREDICTED: uncharacterized protein LOC105636953 [Jatropha curcas]
17 Hb_001609_080 0.1695319407 - - hypothetical protein POPTR_0017s05660g [Populus trichocarpa]
18 Hb_003086_180 0.1695591929 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
19 Hb_005653_100 0.1704094563 - - hypothetical protein POPTR_0004s19580g [Populus trichocarpa]
20 Hb_001006_200 0.1718535984 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_099198_010 Hb_099198_010 Hb_084495_010 Hb_084495_010 Hb_099198_010--Hb_084495_010 Hb_003121_020 Hb_003121_020 Hb_099198_010--Hb_003121_020 Hb_014113_010 Hb_014113_010 Hb_099198_010--Hb_014113_010 Hb_010839_070 Hb_010839_070 Hb_099198_010--Hb_010839_070 Hb_000407_110 Hb_000407_110 Hb_099198_010--Hb_000407_110 Hb_001652_050 Hb_001652_050 Hb_099198_010--Hb_001652_050 Hb_084495_010--Hb_003121_020 Hb_084495_010--Hb_014113_010 Hb_084495_010--Hb_010839_070 Hb_000640_270 Hb_000640_270 Hb_084495_010--Hb_000640_270 Hb_084495_010--Hb_000407_110 Hb_003121_020--Hb_014113_010 Hb_003121_020--Hb_010839_070 Hb_001571_010 Hb_001571_010 Hb_003121_020--Hb_001571_010 Hb_003121_020--Hb_000640_270 Hb_183700_010 Hb_183700_010 Hb_014113_010--Hb_183700_010 Hb_002766_040 Hb_002766_040 Hb_014113_010--Hb_002766_040 Hb_003581_240 Hb_003581_240 Hb_014113_010--Hb_003581_240 Hb_010839_070--Hb_000640_270 Hb_117464_010 Hb_117464_010 Hb_010839_070--Hb_117464_010 Hb_008160_020 Hb_008160_020 Hb_010839_070--Hb_008160_020 Hb_010839_070--Hb_001571_010 Hb_071381_010 Hb_071381_010 Hb_010839_070--Hb_071381_010 Hb_001081_020 Hb_001081_020 Hb_010839_070--Hb_001081_020 Hb_006919_010 Hb_006919_010 Hb_000407_110--Hb_006919_010 Hb_001609_080 Hb_001609_080 Hb_000407_110--Hb_001609_080 Hb_007483_030 Hb_007483_030 Hb_000407_110--Hb_007483_030 Hb_008080_040 Hb_008080_040 Hb_000407_110--Hb_008080_040 Hb_005653_100 Hb_005653_100 Hb_000407_110--Hb_005653_100 Hb_004586_080 Hb_004586_080 Hb_000407_110--Hb_004586_080 Hb_023774_010 Hb_023774_010 Hb_001652_050--Hb_023774_010 Hb_000613_270 Hb_000613_270 Hb_001652_050--Hb_000613_270 Hb_003086_180 Hb_003086_180 Hb_001652_050--Hb_003086_180 Hb_047923_010 Hb_047923_010 Hb_001652_050--Hb_047923_010 Hb_002157_180 Hb_002157_180 Hb_001652_050--Hb_002157_180 Hb_008111_020 Hb_008111_020 Hb_001652_050--Hb_008111_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0120731 0.0108521 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0521947 0

CAGE analysis