Hb_099509_010

Information

Type -
Description -
Location Contig99509: 3410-3893
Sequence    

Annotation

kegg
ID pop:POPTR_0010s11470g
description POPTRDRAFT_566421; hypothetical protein
nr
ID XP_012072348.1
description PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
swissprot
ID Q9ZUA5
description Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1
trembl
ID A0A067KT57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04791 PE=4 SV=1
Gene Ontology
ID GO:0005774
description vacuolar iron transporter 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099509_010 0.0 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
2 Hb_000103_170 0.0181878069 - - uncharacterized protein LOC100501254 [Zea mays]
3 Hb_006277_090 0.0255341017 - - PREDICTED: uncharacterized protein LOC105649700 [Jatropha curcas]
4 Hb_009083_060 0.0579135065 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
5 Hb_000032_130 0.0585938837 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
6 Hb_000037_210 0.0587630677 - - -
7 Hb_003428_020 0.0613667355 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
8 Hb_007676_090 0.0657510533 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
9 Hb_097104_010 0.0663413774 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
10 Hb_000186_020 0.0958321178 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]
11 Hb_002701_100 0.0978735039 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
12 Hb_000084_270 0.1029799415 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
13 Hb_003729_050 0.1157055727 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
14 Hb_014870_010 0.1254513181 - - PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
15 Hb_006355_100 0.1254564765 - - hypothetical protein glysoja_002455 [Glycine soja]
16 Hb_002571_110 0.1333677502 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
17 Hb_008032_010 0.134772686 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
18 Hb_000016_140 0.1371238949 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
19 Hb_017358_060 0.138930708 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
20 Hb_132840_060 0.1409984559 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]

Gene co-expression network

sample Hb_099509_010 Hb_099509_010 Hb_000103_170 Hb_000103_170 Hb_099509_010--Hb_000103_170 Hb_006277_090 Hb_006277_090 Hb_099509_010--Hb_006277_090 Hb_009083_060 Hb_009083_060 Hb_099509_010--Hb_009083_060 Hb_000032_130 Hb_000032_130 Hb_099509_010--Hb_000032_130 Hb_000037_210 Hb_000037_210 Hb_099509_010--Hb_000037_210 Hb_003428_020 Hb_003428_020 Hb_099509_010--Hb_003428_020 Hb_000103_170--Hb_006277_090 Hb_000103_170--Hb_000032_130 Hb_097104_010 Hb_097104_010 Hb_000103_170--Hb_097104_010 Hb_000103_170--Hb_009083_060 Hb_000103_170--Hb_000037_210 Hb_006277_090--Hb_000032_130 Hb_006277_090--Hb_097104_010 Hb_006277_090--Hb_009083_060 Hb_006277_090--Hb_000037_210 Hb_009083_060--Hb_000037_210 Hb_009083_060--Hb_003428_020 Hb_007676_090 Hb_007676_090 Hb_009083_060--Hb_007676_090 Hb_000186_020 Hb_000186_020 Hb_009083_060--Hb_000186_020 Hb_000084_270 Hb_000084_270 Hb_009083_060--Hb_000084_270 Hb_000032_130--Hb_097104_010 Hb_005253_050 Hb_005253_050 Hb_000032_130--Hb_005253_050 Hb_171810_020 Hb_171810_020 Hb_000032_130--Hb_171810_020 Hb_000037_210--Hb_003428_020 Hb_000037_210--Hb_007676_090 Hb_000037_210--Hb_000186_020 Hb_000037_210--Hb_000084_270 Hb_003428_020--Hb_007676_090 Hb_003428_020--Hb_000186_020 Hb_003428_020--Hb_000084_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.862655 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.269772

CAGE analysis