Hb_099698_010

Information

Type -
Description -
Location Contig99698: 15026-16304
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099698_010 0.0 - - -
2 Hb_000040_050 0.1130080337 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
3 Hb_004712_110 0.1199128836 - - 30S ribosomal protein S10, putative [Ricinus communis]
4 Hb_008406_130 0.1430505161 - - -
5 Hb_007441_070 0.1433482424 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
6 Hb_000173_210 0.1444209009 - - PREDICTED: serine incorporator 3 [Jatropha curcas]
7 Hb_003243_020 0.1456216839 - - PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
8 Hb_000940_040 0.1461340822 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
9 Hb_045502_010 0.1517091562 - - prefoldin subunit 1 [Jatropha curcas]
10 Hb_007757_100 0.1523381495 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
11 Hb_000392_280 0.1545348793 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
12 Hb_002518_300 0.1546335002 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
13 Hb_000261_520 0.1616992143 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
14 Hb_000619_070 0.1628231087 - - PREDICTED: DNA mismatch repair protein MLH1 [Jatropha curcas]
15 Hb_005228_120 0.1631109857 - - phospholipase d beta, putative [Ricinus communis]
16 Hb_004531_090 0.1642816571 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
17 Hb_003580_040 0.1650273762 - - PREDICTED: protein ENHANCED DOWNY MILDEW 2-like [Jatropha curcas]
18 Hb_003673_020 0.1674127966 - - hypothetical protein JCGZ_20998 [Jatropha curcas]
19 Hb_019871_020 0.1674621889 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
20 Hb_011644_020 0.167473152 - - PREDICTED: choline-phosphate cytidylyltransferase 2 [Vitis vinifera]

Gene co-expression network

sample Hb_099698_010 Hb_099698_010 Hb_000040_050 Hb_000040_050 Hb_099698_010--Hb_000040_050 Hb_004712_110 Hb_004712_110 Hb_099698_010--Hb_004712_110 Hb_008406_130 Hb_008406_130 Hb_099698_010--Hb_008406_130 Hb_007441_070 Hb_007441_070 Hb_099698_010--Hb_007441_070 Hb_000173_210 Hb_000173_210 Hb_099698_010--Hb_000173_210 Hb_003243_020 Hb_003243_020 Hb_099698_010--Hb_003243_020 Hb_030627_040 Hb_030627_040 Hb_000040_050--Hb_030627_040 Hb_000040_050--Hb_004712_110 Hb_004376_030 Hb_004376_030 Hb_000040_050--Hb_004376_030 Hb_000261_520 Hb_000261_520 Hb_000040_050--Hb_000261_520 Hb_001534_070 Hb_001534_070 Hb_000040_050--Hb_001534_070 Hb_004712_110--Hb_000173_210 Hb_005228_120 Hb_005228_120 Hb_004712_110--Hb_005228_120 Hb_004712_110--Hb_001534_070 Hb_000940_040 Hb_000940_040 Hb_004712_110--Hb_000940_040 Hb_008406_130--Hb_003243_020 Hb_045502_010 Hb_045502_010 Hb_008406_130--Hb_045502_010 Hb_000544_120 Hb_000544_120 Hb_008406_130--Hb_000544_120 Hb_008406_130--Hb_000040_050 Hb_031073_010 Hb_031073_010 Hb_008406_130--Hb_031073_010 Hb_007441_070--Hb_000940_040 Hb_011644_020 Hb_011644_020 Hb_007441_070--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007441_070--Hb_019871_020 Hb_001582_030 Hb_001582_030 Hb_007441_070--Hb_001582_030 Hb_001357_190 Hb_001357_190 Hb_007441_070--Hb_001357_190 Hb_000152_890 Hb_000152_890 Hb_007441_070--Hb_000152_890 Hb_000392_280 Hb_000392_280 Hb_000173_210--Hb_000392_280 Hb_000173_370 Hb_000173_370 Hb_000173_210--Hb_000173_370 Hb_002897_040 Hb_002897_040 Hb_000173_210--Hb_002897_040 Hb_000619_070 Hb_000619_070 Hb_000173_210--Hb_000619_070 Hb_006631_010 Hb_006631_010 Hb_000173_210--Hb_006631_010 Hb_035360_010 Hb_035360_010 Hb_000173_210--Hb_035360_010 Hb_002518_300 Hb_002518_300 Hb_003243_020--Hb_002518_300 Hb_006882_010 Hb_006882_010 Hb_003243_020--Hb_006882_010 Hb_002159_030 Hb_002159_030 Hb_003243_020--Hb_002159_030 Hb_001901_080 Hb_001901_080 Hb_003243_020--Hb_001901_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.3002 0.324249 0.659313 0.574286 4.61104 2.68869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.275668 0.649683 0.731292 0.2705 0.40338

CAGE analysis